Gene PP_3975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3975 
Symbol 
ID1046588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4483000 
End bp4483461 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content59% 
IMG OID637147385 
Producthypothetical protein 
Protein accessionNP_746105 
Protein GI26990680 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.123478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCTT CACGACCTTT CAACGACGAC ACTGCTTACT GGGGCGTTTC ATGGGAAGAG 
GGCTACGGCT ATCCGCAAGC GCGGCGAGTT GGCAACGAGA TCTTCATCTC GGGGCAGTTC
AACCATGACG AAGAGGGCAA CCTGGTAGCG CCGGCGCCAC TGAATGCTGA CGGTCGTCCG
AGCGATTTCT CGTCAATGGG CGAACAGATG CGGGTTTCCT ACGACAACAT TGCCAAGTTG
TTGGCCTTGT ATGGCGCCAC GATGCAGGAT GTCGTTGAGG AGACGCTGTA TGTGTTGGAC
ATGGACGCAG CCTTCGCCGT AGTCGGTAAG GTGCGCAAAG CGGCCTATGG CACCGAGCGC
CCGCAGGCGG CCAGTAATAT CATCGGTGTA TCGCGGCTCG CACAGCGTCC CCAGCTGATC
GAGATCGTGT GTCGTGCTGT GATCGGCACC CAAGCCAAAT GA
 
Protein sequence
MAASRPFNDD TAYWGVSWEE GYGYPQARRV GNEIFISGQF NHDEEGNLVA PAPLNADGRP 
SDFSSMGEQM RVSYDNIAKL LALYGATMQD VVEETLYVLD MDAAFAVVGK VRKAAYGTER
PQAASNIIGV SRLAQRPQLI EIVCRAVIGT QAK