| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3952 |
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| Symbol | pcaJ |
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| ID | 1046612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4458066 |
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| End bp | 4458707 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147362 |
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| Product | 3-oxoadipate CoA-transferase, subunit B |
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| Protein accession | NP_746082 |
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| Protein GI | 26990657 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.375307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCA CCAAAAAGCT CTCCCGCACC GAGATGGCCC AACGCGTGGC CGCAGACATC
CAGGAAGGCG CGTACGTAAA CCTGGGCATC GGCGCACCGA CCCTGGTGGC CAACTACCTG
GGCGACAAGG AAGTGTTCCT GCACAGCGAG AACGGCCTGC TGGGCATGGG CCCAAGCCCT
GCGCCGGGCG AGGAAGACGA TGACCTGATC AACGCCGGCA AGCAGCACGT CACCCTGCTG
ACCGGTGGTG CCTTCTTCCA CCATGCCGAT TCGTTCTCGA TGATGCGTGG CGGCCACCTG
GACATCGCTG TACTGGGCGC CTTCCAGGTG TCGGTCAAGG GCGACCTGGC CAACTGGCAC
ACGGGTGCCG AAGGCTCGAT CCCGGCCGTA GGCGGTGCAA TGGACCTGGC CACCGGCGCC
CGCCAGGTGT TCGTGATGAT GGACCACCTG ACCAAGACCG GCGAAAGCAA GCTGGTGCCC
GAGTGCACCT ACCCGCTGAC CGGTATCGCT TGCGTCAGCC GCATCTACAC CGACCTGGCC
GTACTGGAAG TGACACCTGA AGGGCTGAAA GTGGTCGAAA TCTGCGCGGA CATCGACTTT
GACGAGCTGC AGAAACTCAG TGGCGTGCCG CTGATCAAGT GA
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| Protein sequence | MTITKKLSRT EMAQRVAADI QEGAYVNLGI GAPTLVANYL GDKEVFLHSE NGLLGMGPSP
APGEEDDDLI NAGKQHVTLL TGGAFFHHAD SFSMMRGGHL DIAVLGAFQV SVKGDLANWH
TGAEGSIPAV GGAMDLATGA RQVFVMMDHL TKTGESKLVP ECTYPLTGIA CVSRIYTDLA
VLEVTPEGLK VVEICADIDF DELQKLSGVP LIK
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