| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3948 |
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| Symbol | |
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| ID | 1046616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4450396 |
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| End bp | 4453959 |
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| Gene Length | 3564 bp |
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| Protein Length | 1187 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637147358 |
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| Product | aldehyde dehydrogenase family protein, putative/cytochrome c family protein, putative |
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| Protein accession | NP_746078 |
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| Protein GI | 26990653 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.564465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACT CACAACAGGT GCCCAGCCGC GACCAACTGC TGGCCAAGAC CGGCGTGTTG
CTGATCGTCG ACCAGATCAC CCCGCCCTCA GGCCCTGTGG CCAAGGGCGT GACACCTACA
GTCAAGGAAC GTGAGCTGGC GCTGTTCATC GCGGTCAGCG ACGACGGCAT GGTCTACGCC
TTCAATGGTC ATGTCGACCT GGGCACTGGC ATCCGTACCT CGCTGGCGCA AATCGTCGCC
GAAGAGCTGG ACCTGCGCAT GGACCAGGTG CACATGGTGC TGGGCGACAC CGAGCGGGCA
CCCAACCAGG GCGCGACCAT TGCCAGCGCC ACCCTGCAGA TTTCCGCGGT ACCGCTGCGC
AAGGCCGCAG CCACAGCGCG ACGCTATCTG TTGCAACAGG CCGCCCTACG CCTTGGCTGC
CCGCCCGAAA TGCTGCGCAT TGAAGACGGC ACGGTTATCG CCAGTAACGG CAGCACGCTG
AGCTTTGCCG AACTGGTGCA AGGCAAGAAC CACCAGCTGC ACATTGCCGA CGACGCCCCG
CTCAAGGCCA TCGAGGACTA CCGCCTGGTC GGGCGCAGCG CCCCTCGAGT AGACATCCCT
GGCAAGGCCA CCGGCGAGCT GACCTATGTG CACGACATGC GCCTGCCCAA CATGCTTCAC
GGTCGGGTCA TCCGCCCGCC CTATGCCGGC CATGACAGCG GCGACTTTGT CGGCAACAGC
TTGCTGGCGG TGGATGAGTC TTCCATCGCC CATCTACCCG GCGTGGTCGC CGTGGTGGTC
ATCCGCGACT TCGTCGGTGT GGTGGCAGAG CGCGAAGAGC AAGCCATCCG TGCAGCCCAT
GAGCTGAAAG TCAGCTGGAA GCCATTCACA GGCAAGCTGC CCGACCTTAG CGATGTCGCC
CAGGCCATCC GCGACAACCC GCGCGTGCAG CGCACCGTGC TGGACCAGGG CGATGTCGAC
GGCGGCATCG CCAATGCCAG CCAGCGCCTG AGCCGCAGCT ACCTGTGGCC TTACCAGCTG
CACGCATCGA TCGGCCCATC ATGTGCACTG GCCGACTTCA CCGCAGGGCA GATCCGCGTG
TGGTCAGGTA CGCAGAACCC GCACCTGCTG CGCGCAGACC TGGCCTGGCT GCTGGCGTGC
GATGAAGCAC GCATCGAGAT CATTCGCATG GAAGCAGCCG GTTGTTATGG CCGCAACTGC
GCCGATGACG TGTGCGCCGA CGCGGTGCTG CTGTCGCGTG CGGTGCAGCG CCCGGTGCGG
GTGCAGCTGA CCCGCGAACA GGAACACGTG TGGGAGCCCA AGGGCACCGC GCAACTGATG
GAAATCGACG GCGGCCTGAA CGCCGATGGC AGCGTGGCCG CCTATGACTT CCAGACCAGC
TACCCGTCCA ATGGCGCGCC CACCCTGGCC CTGCTGCTGA CCGGTGCCGT GGAACCGGTG
CCGGCGCTGT TCGAGATGGG CGATCGCACG TCGATCCCGC CTTACGATTA CGAACACATG
CGCGTCACCA TCAATGACAT GACGCCACTG GTGCGTGCCT CATGGATGCG GGGTGTGTCG
GCCATGCCCA ACAGCTTCGC CCATGAGTCG TACATCGATG AACTGGCCTT CGCCGCTGGC
GTCGACCCGG TCGAATATCG CCTCAAGCAC CTGTCCGACC CGCGCGCCAT CGACCTGGTC
AAAGCCACTG CTGAACGCGC GCAATGGCAG CCGCATACCC GGCCCATGCA GACACAGGCC
GAAGGTGATG TGCTGCGCGG CCGGGGTTTT GCCTATGCGC GCTATATCCA CAGTAAATTT
CCCGGCTTCG GCGCGGCCTG GGCAGCCTGG GTGGCTGATG TCGCAGTGGA CCGGCGCACG
GGCGAAGTGG CCGTCACCCG CGTGGTGATC GGCCACGATG CCGGGATGAT GGTCAACCCC
GAGGGTGTGC GTCACCAGAT CCACGGTAAC GTCATCCAGT CCACCAGCCG GGTACTCAAG
GAGCAGGTCA GTTTCGAGGA ATCGACAGTG GCGAGCAAGG AATGGGGCGG CTACCCGATC
CTGACCTTCC CCGAGCTGCC GGCTATCGAC GTGATGATGC TGCCGCGCCA GCACGAGCCG
CCAATGGGCA GTGGCGAGTC AGCCTCGGTA CCCAGCGCAG CGGCCATCGC CAATGCCATT
TTCGACGCCA CCGGCATTCG TTTTCGCGAG CTGCCGATCA CAGCCGAACG CGTGCGTGCT
GCGCTCGGTG GCGAAGGCCA AGGGCCAGAT GCGCCCGCGC CAGCGCAGCC GTCAACCAAG
CGTTCGAAGT GGTGGTTCGG CTCGCTGGCC GGGGTGTTCG GCGCCGCATT GGGCATGCTT
GCCACCGCCT TGCCCTGGCG CGCCGAAATC GCCCCGGTAA CGCCACCTGG TGTCGGCAGC
TGGAGCGCCG CCATGCTCGA GCGCGGGCGC CAGGTGGCGG CGGCCGGCGA CTGCGCCGTG
TGCCATACGG TCAGCGGCGG CAAGGCCAAT GCCGGGGGGC TGGCAATGGA TACGCCTTTC
GGCACGTTGT ACAGCACCAA TATCACCCCC GACCCGGAAA CCGGTATCGG CCGCTGGTCC
TTCGCCGCCT TCGAGCGGGC CATGCGCGAA GGTATCAGCC GCGATGGCCG GCACCTGTAC
CCGGCGTTTC CCTACACCTC GTTTCGCAAC ATCAACGACG CCGACATGCA AGCGCTGTAT
GCCTACCTGA TGTCGCAAAC ACCGGTACGC CAGGAAGCGC CCGCCAACCA GATGCGCTTC
CCGTTCAACC AGCGGCCGCT GATGGCCGGC TGGAATGCGC GGTTTCTGCA ACGCGGCGAA
TACCAGCCCG ACCCGCAGCG CAGCGCGCAG TGGAACCGCG GTGCCTACCT GGTCGACGGC
CTGGGCCACT GCACGGCCTG CCATTCGCCG CGCAACCTGA TGGGCGCAGA AAAAGGCGGT
AGCAGCTACC TTGCTGGCGG CATGGTCGAT GGCTGGGAGG CCCCGGCCTT GAATGCCCTG
GGCAAGTCAT CGACGCCGTG GAGCGAAGAC GAGTTGTTCA ACTACCTCAG CACCGGCTTC
TCCGAAAAAC ACGGCGTGGC GGCCGGCCCC ATGGGCCCGG TGGTCAGTGA GCTTGCCACC
CTGCCAAAAA GCGACGTGCG CGCCATCGCC CACTACCTCA GTTCCCTGGA GGGCGAGCCG
CAGGCACTGG CCGCCAATGC CGCGCCCCAG GTGGACACGC ACGTGTCGCT GAGCAACGGC
GAGCGGGTAT TCAAAGGTGC GTGCCTGGGC TGCCACAGTG ATGGGCTGGG GCCGAAGTTG
TTTGGCGTCA GCCCGTCGAT GGCGGTCAAC AGCAACGTCC ACAGCGACCT GCCGGACAAC
CTGCTGCGCG TGGTGCTGCA CGGCATTCCG ACGCCGGCAA CCCGCGACCT GGGCTACATG
CCTGGTTTCA AGGACAGCCT GTCGGACCGC CAGGTAGCCG ACCTCGCGGC CTACCTGCGC
CATCGTTTTG CCGCCGACAA ACCGGCCTGG CAAGGGCTGG CGTCCAAGGC TGCGCAGGTA
CGCGCCAACC CTGGCAGCCA CTGA
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| Protein sequence | MNHSQQVPSR DQLLAKTGVL LIVDQITPPS GPVAKGVTPT VKERELALFI AVSDDGMVYA
FNGHVDLGTG IRTSLAQIVA EELDLRMDQV HMVLGDTERA PNQGATIASA TLQISAVPLR
KAAATARRYL LQQAALRLGC PPEMLRIEDG TVIASNGSTL SFAELVQGKN HQLHIADDAP
LKAIEDYRLV GRSAPRVDIP GKATGELTYV HDMRLPNMLH GRVIRPPYAG HDSGDFVGNS
LLAVDESSIA HLPGVVAVVV IRDFVGVVAE REEQAIRAAH ELKVSWKPFT GKLPDLSDVA
QAIRDNPRVQ RTVLDQGDVD GGIANASQRL SRSYLWPYQL HASIGPSCAL ADFTAGQIRV
WSGTQNPHLL RADLAWLLAC DEARIEIIRM EAAGCYGRNC ADDVCADAVL LSRAVQRPVR
VQLTREQEHV WEPKGTAQLM EIDGGLNADG SVAAYDFQTS YPSNGAPTLA LLLTGAVEPV
PALFEMGDRT SIPPYDYEHM RVTINDMTPL VRASWMRGVS AMPNSFAHES YIDELAFAAG
VDPVEYRLKH LSDPRAIDLV KATAERAQWQ PHTRPMQTQA EGDVLRGRGF AYARYIHSKF
PGFGAAWAAW VADVAVDRRT GEVAVTRVVI GHDAGMMVNP EGVRHQIHGN VIQSTSRVLK
EQVSFEESTV ASKEWGGYPI LTFPELPAID VMMLPRQHEP PMGSGESASV PSAAAIANAI
FDATGIRFRE LPITAERVRA ALGGEGQGPD APAPAQPSTK RSKWWFGSLA GVFGAALGML
ATALPWRAEI APVTPPGVGS WSAAMLERGR QVAAAGDCAV CHTVSGGKAN AGGLAMDTPF
GTLYSTNITP DPETGIGRWS FAAFERAMRE GISRDGRHLY PAFPYTSFRN INDADMQALY
AYLMSQTPVR QEAPANQMRF PFNQRPLMAG WNARFLQRGE YQPDPQRSAQ WNRGAYLVDG
LGHCTACHSP RNLMGAEKGG SSYLAGGMVD GWEAPALNAL GKSSTPWSED ELFNYLSTGF
SEKHGVAAGP MGPVVSELAT LPKSDVRAIA HYLSSLEGEP QALAANAAPQ VDTHVSLSNG
ERVFKGACLG CHSDGLGPKL FGVSPSMAVN SNVHSDLPDN LLRVVLHGIP TPATRDLGYM
PGFKDSLSDR QVADLAAYLR HRFAADKPAW QGLASKAAQV RANPGSH
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