Gene PP_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3777 
Symbol 
ID1046355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4305213 
End bp4306052 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID637147185 
Producthypothetical protein 
Protein accessionNP_745907 
Protein GI26990482 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00165446 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACTA TGACCGCGCC CGGAAGTGTT CACACTGACC TGGCGGCCTA TAACCTGTAC 
TTCGGCATGG GGCAGCGGAT TACGTTGATC GACAACCCGA AGGTGTTCAG GGTGAGCCCT
GCCGGAGAAG CGTTCGGGTC ATTGATTGCT AGGCGTTTCG GGGGGCGTGA CAGAGATGCC
CGTTTTCTTG ACGTGGGGAC GGGGAGTGGT GTGCACGCCT TACTGCTGCG ACAGTTAGGC
ATGCGGCATA TCACCGCCTG CGACATTTCT GTTGACGCGG TTCAAGCGGC CCGTGCCAAT
GAGCTGGTCA ACCTGGGCGA ATCCTGTATC GAATTCGTAC AGGGAGATCT GTTCGACGCA
ATGCCTGCGG CAGAGGACGG ATACGATGTG ATCCTATTCA ATCCGCCAGG GTGGCAGACG
CCCTCGGATG GCTTCCTCGA TGCACTACAG CGCATCGAGG CTGCCCAAGG GCTGTCGCTG
GAAGCGATGT TCTATGGCGA GCGGACCTTG CGCAGGTTTT TCGAACGGGT GCCGAGCTAC
CTGAAGCCCG GAGGCAAGCT GATCATCGGG CTGAATTCGT TGGTCGGCAT TGCCGGTGTC
ATGCGTGACC TCTATGACAT GCATGAGGCG CGTTTCAAGA TCGATTGGTC ATTGCTCGAG
CGCCATGAGA TTCCCTTGGT GCTATATACC GAGCAATGGC GTGCTCTGCA GGGGTTGTTG
CATGAGGAGA TTGAACGTTG GACCCGCCAG GGCCGCGCGC ACTGCCGTTT TGACGACGCC
GGCGTGCTGC ACTGGTCCTA CGAGATCATC GAGTTCTCAT TCACGCCGTT AGCCGAGTGA
 
Protein sequence
MTTMTAPGSV HTDLAAYNLY FGMGQRITLI DNPKVFRVSP AGEAFGSLIA RRFGGRDRDA 
RFLDVGTGSG VHALLLRQLG MRHITACDIS VDAVQAARAN ELVNLGESCI EFVQGDLFDA
MPAAEDGYDV ILFNPPGWQT PSDGFLDALQ RIEAAQGLSL EAMFYGERTL RRFFERVPSY
LKPGGKLIIG LNSLVGIAGV MRDLYDMHEA RFKIDWSLLE RHEIPLVLYT EQWRALQGLL
HEEIERWTRQ GRAHCRFDDA GVLHWSYEII EFSFTPLAE