Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3777 |
Symbol | |
ID | 1046355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4305213 |
End bp | 4306052 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637147185 |
Product | hypothetical protein |
Protein accession | NP_745907 |
Protein GI | 26990482 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00165446 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAACTA TGACCGCGCC CGGAAGTGTT CACACTGACC TGGCGGCCTA TAACCTGTAC TTCGGCATGG GGCAGCGGAT TACGTTGATC GACAACCCGA AGGTGTTCAG GGTGAGCCCT GCCGGAGAAG CGTTCGGGTC ATTGATTGCT AGGCGTTTCG GGGGGCGTGA CAGAGATGCC CGTTTTCTTG ACGTGGGGAC GGGGAGTGGT GTGCACGCCT TACTGCTGCG ACAGTTAGGC ATGCGGCATA TCACCGCCTG CGACATTTCT GTTGACGCGG TTCAAGCGGC CCGTGCCAAT GAGCTGGTCA ACCTGGGCGA ATCCTGTATC GAATTCGTAC AGGGAGATCT GTTCGACGCA ATGCCTGCGG CAGAGGACGG ATACGATGTG ATCCTATTCA ATCCGCCAGG GTGGCAGACG CCCTCGGATG GCTTCCTCGA TGCACTACAG CGCATCGAGG CTGCCCAAGG GCTGTCGCTG GAAGCGATGT TCTATGGCGA GCGGACCTTG CGCAGGTTTT TCGAACGGGT GCCGAGCTAC CTGAAGCCCG GAGGCAAGCT GATCATCGGG CTGAATTCGT TGGTCGGCAT TGCCGGTGTC ATGCGTGACC TCTATGACAT GCATGAGGCG CGTTTCAAGA TCGATTGGTC ATTGCTCGAG CGCCATGAGA TTCCCTTGGT GCTATATACC GAGCAATGGC GTGCTCTGCA GGGGTTGTTG CATGAGGAGA TTGAACGTTG GACCCGCCAG GGCCGCGCGC ACTGCCGTTT TGACGACGCC GGCGTGCTGC ACTGGTCCTA CGAGATCATC GAGTTCTCAT TCACGCCGTT AGCCGAGTGA
|
Protein sequence | MTTMTAPGSV HTDLAAYNLY FGMGQRITLI DNPKVFRVSP AGEAFGSLIA RRFGGRDRDA RFLDVGTGSG VHALLLRQLG MRHITACDIS VDAVQAARAN ELVNLGESCI EFVQGDLFDA MPAAEDGYDV ILFNPPGWQT PSDGFLDALQ RIEAAQGLSL EAMFYGERTL RRFFERVPSY LKPGGKLIIG LNSLVGIAGV MRDLYDMHEA RFKIDWSLLE RHEIPLVLYT EQWRALQGLL HEEIERWTRQ GRAHCRFDDA GVLHWSYEII EFSFTPLAE
|
| |