| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3713 |
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| Symbol | catA |
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| ID | 1045930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4235833 |
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| End bp | 4236768 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637147124 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | NP_745846 |
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| Protein GI | 26990421 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0936844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA AAATTTCCCA CACTGCCGAC ATTCAAGCCT TCTTCAACCG GGTAGCTGGC
CTGGACCATG CCGAAGGAAA CCCGCGCTTC AAGCAGATCA TTCTGCGCGT GCTGCAAGAC
ACCGCCCGCC TGATCGAAGA CCTGGAGATT ACCGAGGACG AGTTCTGGCA CGCCGTCGAC
TACCTCAACC GCCTGGGCGG CCGTAACGAG GCAGGCCTGC TGGCTGCTGG CCTGGGTATC
GAGCACTTCC TCGACCTGCT GCAGGATGCC AAGGATGCCG AAGCCGGCCT TGGCGGCGGC
ACCCCGCGCA CCATCGAAGG CCCGTTGTAC GTTGCCGGGG CGCCGCTGGC CCAGGGCGAA
GCGCGCATGG ACGACGGCAC TGACCCAGGC GTGGTGATGT TCCTTCAGGG CCAGGTGTTC
GATGCCGACG GCAAGCCGTT GGCCGGTGCC ACCGTCGACC TGTGGCACGC CAATACCCAG
GGCACCTATT CGTACTTCGA TTCGACCCAG TCCGAGTTCA ACCTGCGTCG GCGTATCATC
ACCGATGCCG AGGGCCGCTA CCGCGCGCGC TCGATCGTGC CGTCCGGGTA TGGCTGCGAC
CCGCAGGGCC CAACCCAGGA ATGCCTGGAC CTGCTCGGCC GCCACGGCCA GCGCCCGGCG
CACGTGCACT TCTTCATCTC GGCACCGGGG CACCGCCACC TGACCACGCA GATCAACTTT
GCTGGCGACA AGTACCTGTG GGACGACTTT GCCTATGCCA CCCGCGACGG GCTGATCGGC
GAACTGCGTT TTGTCGAGGA TGCGGCGGCG GCGCGCGACC GCGGTGTGCA AGGCGAGCGC
TTTGCCGAGC TGTCATTCGA CTTCCGCTTG CAGGGTGCCA AGTCGCCTGA CGCCGAGGCG
CGAAGCCATC GGCCGCGGGC GTTGCAGGAG GGCTGA
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| Protein sequence | MTVKISHTAD IQAFFNRVAG LDHAEGNPRF KQIILRVLQD TARLIEDLEI TEDEFWHAVD
YLNRLGGRNE AGLLAAGLGI EHFLDLLQDA KDAEAGLGGG TPRTIEGPLY VAGAPLAQGE
ARMDDGTDPG VVMFLQGQVF DADGKPLAGA TVDLWHANTQ GTYSYFDSTQ SEFNLRRRII
TDAEGRYRAR SIVPSGYGCD PQGPTQECLD LLGRHGQRPA HVHFFISAPG HRHLTTQINF
AGDKYLWDDF AYATRDGLIG ELRFVEDAAA ARDRGVQGER FAELSFDFRL QGAKSPDAEA
RSHRPRALQE G
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