| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3680 |
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| Symbol | |
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| ID | 1046510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4182219 |
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| End bp | 4184222 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637147092 |
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| Product | hypothetical protein |
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| Protein accession | NP_745814 |
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| Protein GI | 26990389 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.228767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00106717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCACCTC CTCACCATTA CCCTCGTGAG TCAGTGCGAG CGATCAGGAG GAACCGAAAG
GAATCTCATC ACATGAAGCT TTGCAGTCTA CGGATCAGCG GTTTTCAGTC GTTTGGACAG
GACATCACTG ACATAACCTT CGACGGCGTT ACATATCTCC TAGGGCCAAA CGGTGCCGGG
AAGACTGCGA CGTTGCAGGC ATTGGCACGC ATGTTTGGTT TCGAGCCTGG CCTTCGTCGC
CTGCGTCGAT CAGATTTCCA TGTCCCTTTG AACGAGCAGG AGGTACCCGC TCAGCGCTCG
CTCTGGATTG AGGCGGACTT CACATTCGAC GAAACGCTCG ATGATGCCGA AGACGACACA
GTGCCGCCGT TCTTCACGCA AATGACCTTG CAAACGGCTG ACGGGGTTCC CCGTATTCGA
TATCGCTTGG AAGGTATTCT CCACCCTGAT GGCGAGGTAG AGGAGCGTTT ACATTACGTG
ACCCGGATGG ACGAGCATGG GCAACCTACG ACGCTCAAGC CCGTGGCGAA GCGTGAACGA
GACGAGATAC ATGTTCATTA CCTACCTGCT CGCCGGGATC CCGCTGATCA TATTGCCTTT
GGTGCCAGCG CCCTTCTAGG CCGCCTCCTT CGAGCCGTCA ACTGGAGTGA TGACCGGGAC
TCAATCAAGC AGCTCACTGA GCAAATCACT GAGTGCTTGT CGGAGAACGA GTCAATCAAG
ACCTTGAGCG CTGGCCTCAG CGGCGCATGG CAACGTCTTC ACAAAGGCGA TTTCTTCGCG
AATCCATCCC TTACCTTCGC GAACTCTGAA ATTGAGGCAA TCCTGCGGCA CCTCTCGATT
TCCTTCACGC CTGGCCATGG TGAAAGCAAC GTGGACTACG CGAGGTTGAG CGATGGTCAG
AAATCAATGC TGTACCTCTC GCTCGTTCTT ACATCCCTGA CCATAGGCCG CGAGGTCAGA
TCAGGACAGA ACACTTCGTT CGACCCCCTC AAACTGAAGC CTGCTGCCTA TACGATTCTG
GCAGTCGAAG AACCCGAGAA CAGCCTGTCT CCCCATTACC TGGGGCGTAT CGTGAGCTCT
CTGAAATCAT CCGTGGGCGT GGACGCGCAA GCATTGATCG CCACGCAGGC CCCGTCGATG
CTCAGACGAG TTGAGCCTGA CCAGATCAGG TATCTGCGTC TGAATTCAAA GCGAGAAACG
GATGTGTCGA CCATCGTGCT TCCAGACAAG CACAGCGACG CCTACAAGTT CGTTCGAGAA
GCCGTCCAGG CATTTCCCGA GCTCTACTTC GCACGCTTGG TGGTACTTGG TGAGGGGGAT
AGTGAAGAAA TCGTGCTACC TCGAATCCTT CAAGCTAAGG GAGCTCCCGT TGACGAATAC
GCAGTGGCGA TCGCTCCACT AGGGGGGCGC CATGTCAATC ACTTCTGGCG GCTGCTGAAC
GCGCTGGGTA CACCTCATAT GACCCTGCTC GACCTAGACG TGGGGCGCCA TCAAGGTGGC
TGGGGGCGTG TGAACTATGT TCGTACTCAG CTTGATGTAT TCGACCCTAC ACGTAGCATC
CCGGATCACT GGACGCGCCA CTCTTGGGAT GATGCTGAGC GACCTATTCG AACACACCAC
TGGTTCGACA ATGGCAACGA AACCCAGAGC AGCTTGTTCC AGGAGTTAGA AAGCAGAGAT
GTATTTTTCT CGGATCCACT GGATCTGGAT TTCGCGATGC TCAAAGCGTT TCCCGATGCT
TTTGGTGCCG AGCTTTCAGC CCCTACACCG CACGATCACG TAACCGTCCT TGGCAAGAGC
CATTTCAACC CGGGGCAGTA CAATGCTGAG GAACAGCAAC TCTTCGCGGC CTACCACAAG
CTGTTCAAGC TCAGCAGTAA ACCTGCAGCT CACCTGGATG CCTTGGGCAA TCTCACTGAC
ACGGAGCTGC TGGCCTCACT ACCACCATCC CTCAATCGGC TAGCAGACCG GGTCAAAGCC
AAGCTTGAGG AATCTCCCGA GTGA
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| Protein sequence | MPPPHHYPRE SVRAIRRNRK ESHHMKLCSL RISGFQSFGQ DITDITFDGV TYLLGPNGAG
KTATLQALAR MFGFEPGLRR LRRSDFHVPL NEQEVPAQRS LWIEADFTFD ETLDDAEDDT
VPPFFTQMTL QTADGVPRIR YRLEGILHPD GEVEERLHYV TRMDEHGQPT TLKPVAKRER
DEIHVHYLPA RRDPADHIAF GASALLGRLL RAVNWSDDRD SIKQLTEQIT ECLSENESIK
TLSAGLSGAW QRLHKGDFFA NPSLTFANSE IEAILRHLSI SFTPGHGESN VDYARLSDGQ
KSMLYLSLVL TSLTIGREVR SGQNTSFDPL KLKPAAYTIL AVEEPENSLS PHYLGRIVSS
LKSSVGVDAQ ALIATQAPSM LRRVEPDQIR YLRLNSKRET DVSTIVLPDK HSDAYKFVRE
AVQAFPELYF ARLVVLGEGD SEEIVLPRIL QAKGAPVDEY AVAIAPLGGR HVNHFWRLLN
ALGTPHMTLL DLDVGRHQGG WGRVNYVRTQ LDVFDPTRSI PDHWTRHSWD DAERPIRTHH
WFDNGNETQS SLFQELESRD VFFSDPLDLD FAMLKAFPDA FGAELSAPTP HDHVTVLGKS
HFNPGQYNAE EQQLFAAYHK LFKLSSKPAA HLDALGNLTD TELLASLPPS LNRLADRVKA
KLEESPE
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