Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3624 |
Symbol | |
ID | 1046366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4120994 |
End bp | 4121782 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147038 |
Product | hypothetical protein |
Protein accession | NP_745760 |
Protein GI | 26990335 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.78712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC GTTGCTTTCG CCACGTCTTG CTCCTGATGT GCCTGTCACT GCTGCCCCTG GCTGCAACAG CGGATGATGC ATGCCTACGG CTGACCGCCA CAGGCAACCC GGAATACCCC CCGTACCTGT GGCGCGACCC GCTGAACCCT CAGCGACTGA TCGGTGCCAA TGCCGACCTG CTCAAATACC TGGGCAAGCA GTTGGGGCTG GAGATAGAGG TGGTTTACGC CGGGCCGTGG TCACGAGCCC AGGAAGAAGT GCGCACCGGG CGGATCGACT TGATGGCCGG GTATTTCCTG ACCGAAGCGC GCCGGCAGCA TGTGGACTTC ATTGCCCCGC CGTTTTTGCG CACACCCAGC GTCATCTGGG TGCGCCAGGA CAATGCCTTT GCCTACCAGC AATGGGCCGA CCTCAAAGGC CGCAAGGGTG GCACTCTGGT CAACAATAGC CACGGCCAAC AGTTCGATGA ATACGCCCAG GCCAGTCTCA CCCTCGAAGC GGTGCCCACT GCCAGGCAGG CGTTCGAGAA GCTGATGCAC AAGCGCAGCG ATTACGTGGT GTACGAGCAG TATCCTGGCA TGGCGCTGGC GCGCACATTG GGCATCGCAG CCACTGTGCA GGTTTTGCAG CCACCGGTGT CCAGCGAAGG GTTGTACCTG GCAATCTCAC ATGAGTCGCC TTGCAACCGG CCACTGCTGC GTGAGGCGCT GGCGCGGGAG ATGGCGAAGA TCGTTGGCGG GGCCTTGCCC GAGCAGTGGT TGAAACAGAA TCTGGAGCGG TGGCAGTGA
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Protein sequence | MIERCFRHVL LLMCLSLLPL AATADDACLR LTATGNPEYP PYLWRDPLNP QRLIGANADL LKYLGKQLGL EIEVVYAGPW SRAQEEVRTG RIDLMAGYFL TEARRQHVDF IAPPFLRTPS VIWVRQDNAF AYQQWADLKG RKGGTLVNNS HGQQFDEYAQ ASLTLEAVPT ARQAFEKLMH KRSDYVVYEQ YPGMALARTL GIAATVQVLQ PPVSSEGLYL AISHESPCNR PLLREALARE MAKIVGGALP EQWLKQNLER WQ
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