| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3379 |
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| Symbol | |
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| ID | 1047009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3824179 |
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| End bp | 3824958 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637146797 |
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| Product | xylose isomerase domain protein TIM barrel |
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| Protein accession | NP_745519 |
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| Protein GI | 26990094 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.11254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGA ACCCCGTTTC CATCAGTCTC TCCAGCTACG GCGCCGACTT TGTGCGCCAA
CGTGGCCAGG AGCAGTTTCT GGACCTGCTG GCAGCCGCTG GCGTCAGCCG CGTCGAATTG
CGCGAAGAAT TGTTCGCCAG CGCACCGGAC GCAGCTGCGC TGGGCAGGGT CATTGCCGCG
CTGCGCCTGG AATGCCTGTA CTCCACCCCC CTTGAACTGT GGACCGCGCA AGGCGTGCCC
GACCCGCTGC TGGTGCAGAA GCTGGAAATA GCCCGGGCGC TTGGCGCAGT GGCGCTGAAG
GTTTCCTTGG GGCACTTCGA TGAGCACTGC GATGTGACGG CCCTGGCGTC GCTGCTGCCT
GCGCAGGGGC CTCTGTTGCT GGTGGAAAAC GATCAGACCG CACAAGGTGG CAGGATCGAA
CCGATGCTGC AGTTTTTCCA GCGTGTCGAC CCGCTTGGGC TGCGCCTGGG CATGACGTTC
GATATCGGTA ACTGGCAGTG GCAGGGCGAG CCTGCGCCGC AAGCTGCAAG GCAGCTAGGC
CGTTGGGTGC GCTATGTGCA TTGCAAGGCT GTGCAGCGCC GGGCCGATGG CCGTCTGGTT
GCCATACCGC CGCAAGCAGC GGACCTGCAA GCGTGGGCAG CGCTGATGGC CGAGTTCGCG
CCGGGCGTGG TGCGCGCCGT CGAGTACCCC CTGGTGGGCG AAGACCTGCT GGCGCTGACC
CGGGCCCAGG TGCGTCACCT TTCTGCACTG GGCGCTGCGC AGGAGCTGGA CCATGCATGA
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| Protein sequence | MQANPVSISL SSYGADFVRQ RGQEQFLDLL AAAGVSRVEL REELFASAPD AAALGRVIAA
LRLECLYSTP LELWTAQGVP DPLLVQKLEI ARALGAVALK VSLGHFDEHC DVTALASLLP
AQGPLLLVEN DQTAQGGRIE PMLQFFQRVD PLGLRLGMTF DIGNWQWQGE PAPQAARQLG
RWVRYVHCKA VQRRADGRLV AIPPQAADLQ AWAALMAEFA PGVVRAVEYP LVGEDLLALT
RAQVRHLSAL GAAQELDHA
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