| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3340 |
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| Symbol | |
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| ID | 1046984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3776944 |
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| End bp | 3778995 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146758 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_745480 |
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| Protein GI | 26990055 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCGT TCCGTTGCAC CGCACGCGCT GTCCTGTCCG TGCTCGCTGT GTTCAGCCTC
AGCCCGCTGT CACTGGCCGT TGCCGAAACT TTGCCCATTG AAAACTCCAC CCTCACCCTT
GGCGCGGTCA ACGTGACCAG TACCGAAAGC GGCCCGCTGG CCACCAGCAG CGTGCTCAGT
TCGGTGGACA TCCTGGGGGG CGATATCCTC GAAAAGATGC CCGTGACCTA CAGCTGGGAA
CTGTTCAGTC GCGCGCCAGG GGTGATGCTG ACCGAGTTCA ACCAGGGCAC CACCTCGGGC
AAACTGTCGT TTCGCGGCTT CAATGGCGAA GGCGAAGTGA ACGCGGTCAA GTTGCTGATC
GATGGCATCC CCAGCAACAC CAATGACGGC AACATGCCCT TCATCGACTC GGTGTTCCCC
ATGGACATCG ACAGCATCGA AGTGGTGCGC GGCACCAGCG ATCCACGCTA CGGCCTGAAC
AACATCGCCG GTAACGTCAA TATCAACACC CGCACCGGCG GCAACTACAA CAAGGCGCGC
CTGCGCTACG GCAGCTTCAA CACCCGCGAG GTGCAACTGG CCAAGGGCAT CGAGACCAGC
AACTGGACAC AGAACTACTT CTTCGCCCGC CAGCAGGTCG ACGGCTACCG CGACCATGCC
GACACCGAAC GCTACAGCTT CGGCGGCAAA TGGTTCTATA CCCCTGACGA TGGCAGCTAT
CGCCTTGGTC TGATCGCCCG CCACTACGAG TCCGAAGCCC AGGAGGCCGG CTACCTGACC
GAGGATGACG CCCGCCATCA TCCGCGCATG AGCAATGACT ACAACGCCAC GGACAAAGGC
ACGCGGCGAA TGAACCAGGT CAGCGTGCAC TTCGACACCG ACCTGGCCGA GACCCTGTCC
TGGTCGGCCA AGACCTACCT CAACACCTAT GACGACCGAC GCTGGACGCA GTACTGGCGC
ACCAGTTCAC AGCAGGAACG CGACACCTAC GAGGATCAGT ACGGTGCCAT CACCTCGCTG
ACCTGGCGAC CACAGGTGGA CTGGCTGCAC GCCTTTGCGC TGGAAGGTGG CAGCGATATG
CAGAAGCAAC AGAACCGCAG CGAACGCTAC CGCACCGTGG AGCGTGTACG CCAGGCGCAG
ACACGCGACC AGGACTTCGA CTTCAACACG GTCGGTGCCT ATGTACAGGC GGAGATCGAG
CCGTTCGAAT CGCTGAAGAT CGTGCCGGCC TACCGGGTGG ACAAGATCAG TGGCGACTTC
ACCAACAAGA TGACCGGGCA GGACTACGAC ATCAACGACT ACGGGCTGAT CAAGCAGCCC
AAGCTCAGCA TTGTCTATTC GCCGTGGAAG TTCGCCAGCG TTTACGCCAA CTGGGGCCGC
ACCTTCCAGG TCGGGACGGG CGCCGCAGCC TACAAGGTGC CGCCGCGCAA CGAGGACCTG
GACCCGTCGA TCAACGAAGG CTGGGAAACC GGCGTCAAGT TCACCCCGGC CAGCTGGGTC
GATGGCCGCG TGGCCTATTG GCGTCAGGAC GCCTCTGGCG AAGTGAGCCG TCGCCTGAAC
GACCCCAGCG GCGAGTCGGA CAACGTCGGC GAAACACGCC GCTGGGGCTA TGACCTGCAG
GTCAACCTGC ACCCGGACGA ACGAACCGAG GTGTGGATGT CCTACTCCTG GCAGTACTCC
AAGATCCTTG AGCCCAGCAG CGCGTTGCCA GGCAGCAAAG GCCAGGAAAT CGATCACGTG
CCACACCATC TGTGGAACAC CGGCATCAGC TACCAGGCCA CTCCCGCGCT GCAACTGACT
GCCTGGGCGA ACGGGCAGAC CAACTACTAC CTGGAGCGGG AGAACACCCA AGGTACGTAT
GGCGGCTACG TACTGATGAA CCTCGGCGCG ACGTACAAGC TCAGCGAAAC CATGAGCGTG
GACCTGCAGT TGAAGAACCT CACCAACCGC TACTACGAGT ACGTGTGGTA CGACCCGGAC
GGTGCGGATG CTTCCCTGCA CTCCCCGGGT GACGGTCGTG CCCTGTATGC CGGGCTGACG
TTGGACTTCT GA
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| Protein sequence | MPAFRCTARA VLSVLAVFSL SPLSLAVAET LPIENSTLTL GAVNVTSTES GPLATSSVLS
SVDILGGDIL EKMPVTYSWE LFSRAPGVML TEFNQGTTSG KLSFRGFNGE GEVNAVKLLI
DGIPSNTNDG NMPFIDSVFP MDIDSIEVVR GTSDPRYGLN NIAGNVNINT RTGGNYNKAR
LRYGSFNTRE VQLAKGIETS NWTQNYFFAR QQVDGYRDHA DTERYSFGGK WFYTPDDGSY
RLGLIARHYE SEAQEAGYLT EDDARHHPRM SNDYNATDKG TRRMNQVSVH FDTDLAETLS
WSAKTYLNTY DDRRWTQYWR TSSQQERDTY EDQYGAITSL TWRPQVDWLH AFALEGGSDM
QKQQNRSERY RTVERVRQAQ TRDQDFDFNT VGAYVQAEIE PFESLKIVPA YRVDKISGDF
TNKMTGQDYD INDYGLIKQP KLSIVYSPWK FASVYANWGR TFQVGTGAAA YKVPPRNEDL
DPSINEGWET GVKFTPASWV DGRVAYWRQD ASGEVSRRLN DPSGESDNVG ETRRWGYDLQ
VNLHPDERTE VWMSYSWQYS KILEPSSALP GSKGQEIDHV PHHLWNTGIS YQATPALQLT
AWANGQTNYY LERENTQGTY GGYVLMNLGA TYKLSETMSV DLQLKNLTNR YYEYVWYDPD
GADASLHSPG DGRALYAGLT LDF
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