Gene PP_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3139 
Symbol 
ID1046786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3554382 
End bp3555584 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID637146561 
Productglycosyl transferase, group 1 family protein 
Protein accessionNP_745283 
Protein GI26989858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.425615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG CTTACTTCAT CAATCAGTAC CCGAAAGTCA GCCACAGTTT CATCCGTCGC 
GAAATACTGG CGCTGGAGCG CCAAGGGGTT GAGGTGCAAC GTATAGCCCT GCGTGGGTGG
GACGCCGAAG TGCAGGATGC CGAGGACGCA AGCGAACGGG GCAAGACCCG CTACGTATTG
CAAGGTGGGC TCAAGGGGTT GTTGGCACCG ACGTGGCAGG TACTGCGTAC GCAGCCGCGG
CGGTTTTTCC AGGCGCTGTG GCTGGCCATG CGCCTCGGCT TGCGGGCCGA CCGTGCCTGG
CCCTACCACC TGGTCTACCT GGCCGAGGCC TGCCAGGTGC TGCAGTGGTT GCAGGCAGGG
GAGGCGACAC ATGTGCACGC GCATTTCGGC ACCAACTCTA CTGAAGTGGT CATGCTGGCC
AACGCCCTGG GCGGGCCGGC ATACAGCTTT ACCGTGCACG GCCCTGAAGA ATTCGACAAA
CCACAGTTCC TGCACTTGGG TGAGAAAGTA CGGCGCGCCG CCTTTGTCGC GGCGGTGAGC
TCGTACGGGC GCAGCCAGTT GTACCGTTGG GTGGCGCCCG AGCAGTGGGG CAAGGTGAAG
GTGGTGCATT GCGGCCTGGA GCGTGGGTTT CATGAGGTGG CGCCGGTCAA TGTGCCGCCG
GCACCAAGGC TGGTGTGTGT CGGGCGACTG TGCGAACAGA AGGGCCAGCT GCTGTTGCTG
GAAGCGGCGC GCTGTCTCGC TGCCCAGTCG ATCGCCTTCG AGCTGGTGCT GGCGGGTGAC
GGTGAAATGC GCGAGCAGAT CGAGGCCTTG ATTGCCCGGC ACGGCTTGCA GCAGCAAGTG
CGTATCACTG GCTGGATCAG CAGTGCGCAG GTACGCGAGG AAATCCTGGC CGCCCGTGCG
CTGGTGCTAC CCAGCTTCGC CGAGGGCTTG CCCGTGGTCA TCATGGAGGC CATGGCCTTG
CGCCGGCCCG TGCTGACCAC CTATGTAGCG GGTATCCCCG AGCTGGTGCG GCCTGGCGAA
AACGGCTGGC TGTTCCCAGC CGGTGCCGTG GACGAGTTGG CAACAGCCAT GGCCGACTGC
CTGGCGCAAC CGGCCGAGGT ACTGCAGCGC ATGGGCGAGG TGGCCTACCA GCGTGCCGTG
CAACGGCATG ACATCGATAC CGAGGCGGCC AGGCTGGCCG ACTATTTCAA GGCATACGCA
TGA
 
Protein sequence
MRIAYFINQY PKVSHSFIRR EILALERQGV EVQRIALRGW DAEVQDAEDA SERGKTRYVL 
QGGLKGLLAP TWQVLRTQPR RFFQALWLAM RLGLRADRAW PYHLVYLAEA CQVLQWLQAG
EATHVHAHFG TNSTEVVMLA NALGGPAYSF TVHGPEEFDK PQFLHLGEKV RRAAFVAAVS
SYGRSQLYRW VAPEQWGKVK VVHCGLERGF HEVAPVNVPP APRLVCVGRL CEQKGQLLLL
EAARCLAAQS IAFELVLAGD GEMREQIEAL IARHGLQQQV RITGWISSAQ VREEILAARA
LVLPSFAEGL PVVIMEAMAL RRPVLTTYVA GIPELVRPGE NGWLFPAGAV DELATAMADC
LAQPAEVLQR MGEVAYQRAV QRHDIDTEAA RLADYFKAYA