Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2833 |
Symbol | |
ID | 1042700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3233785 |
End bp | 3234756 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146255 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744977 |
Protein GI | 26989552 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0496338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCGG ACATGACCCA TTCCAGCTTT TGCAACTGGA TCCGCTACAA GCACCTGGTG TTGATCGACA CGCTAGCGCG CACGCGCAAC ATGCACGCCA CCGCCACGCG CATGAACCTC AGCCAGCCGG CGCTCAGCAA AATGCTGCGT GACCTTGAGG AGCAGTTCGG CTTTGCCCTG TTCGAGCGCC TGCCGCGCAG CATGCCACCC ACCGAGTTGG GTGAATACGT GGTGCGGTAC GCCCAGGGTG CCCTGGCCGA GTCGCAACAG TTCGTCGACC AGGTCAACCG CCTGCGCAAC GGCGGGCACG GTTTCATCCG CGTTGGCGGG ATCTTTGCCG CGACCGCATT GGTATTGCCG CAGGCCATCG CCGCCATCAA GGCGCGAAGC CCGTTACTGT CGATTGAAGT GGTGGAGCAT TCCAGCGATC ACCTGCTGAC CATGCTCGAG CAGAACAAGC TGGACATCAT GATTGGCCGC TTCACCGAGG AACGCTTCGG TCAGCTGTTC GACTTCCAGC CGCTGGAGCC CGAACCCTTC AGCCTGGTGG TGAACAGCGA GCACCCGCTC AACCAGCTCG ATAACACACC GCTTGAAGCG CTAGGCGATT GGCCGTGGGT GCTGTACCCG GTGGGTACGC CCATCCGCAA CCGCCTGGAG CAGGCGTTCC GGGTGGCCGG AATCGCCACG CCTGCCGACT GCGTGGAGAC CATCTCCATG CCGATGTTCC TGCAGTTGCT GCAATCGGCA CCGATGATTG CCATGCTGCC GCGCTCGATG GTGGCCGCGC AGTTGGCCAG CGGGCAGTTC AAGGAGCTGC GCAGCCCTTT GCAGGTGCCC GCGCTGGAGT ATGGTGTGGT CACCCGCAAG GATGAACCGC TCAGCGCCTC CGCCAGGGCG TTTGTCGAGA TTCTGCTGGA GGGCGCGCAA CGCCGGCGGC AATCTTCGGA AGACACTGCG TTCTGCCCCT AG
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Protein sequence | MPPDMTHSSF CNWIRYKHLV LIDTLARTRN MHATATRMNL SQPALSKMLR DLEEQFGFAL FERLPRSMPP TELGEYVVRY AQGALAESQQ FVDQVNRLRN GGHGFIRVGG IFAATALVLP QAIAAIKARS PLLSIEVVEH SSDHLLTMLE QNKLDIMIGR FTEERFGQLF DFQPLEPEPF SLVVNSEHPL NQLDNTPLEA LGDWPWVLYP VGTPIRNRLE QAFRVAGIAT PADCVETISM PMFLQLLQSA PMIAMLPRSM VAAQLASGQF KELRSPLQVP ALEYGVVTRK DEPLSASARA FVEILLEGAQ RRRQSSEDTA FCP
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