Gene PP_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2823 
Symbol 
ID1042686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3221038 
End bp3222690 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content63% 
IMG OID637146245 
Productmethyl-accepting chemotaxis transducer 
Protein accessionNP_744967 
Protein GI26989542 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCTTCG TCCCGACGAG GCCCGCACAG CCCATGTTCA AAAACATTCC GCTCACCTTG 
AAACTCTTCC TGCCACCTGC CATCGCCCTG TTCGGCATGT TGCTGTTCGT GGGCTACACC
GCGGTGCAAC TGGACGACAA CGACAACCGA TTGGTGTCGC TCGAAAAACA GCGCTACCCA
ACGCTGGAAG CTGCCGACAA CGTGATCTTC CAGTTCTCCC GCCTGCCCGG CCTGCTCAAC
AGCGCCGTGG CAGCGGGCGA GCGGGACACC TTGGATGAAG CGAGCGACGT GCTGGCCGAC
GTCCATGCGC GGCTGCGCGA CCTGGAACCG CTGACCGCTG AACGGGCCGA CCGACACCGG
GAAATTCAAG CCTGGTCGGC GGCGATCAAG CGCTACGCCG ATAACGCGTT CGCCTCCTCC
GGGCAACTGC TCGATGGGGC GGCGTTCGAT GATTTACGCC CCCATTTTGA TCGCATGGCC
AGCGACCTCA AGAACGCCCA GGCGCTCGGC GAGCAGTTTC GCAGCCACGC CTACGCCGAC
TTCCAGAGCA GCTTGACCCA AGTCCGCGCC GACAACGCCA CCACCACGCG CGTCGGCTAC
CTGCTCAGTT TTTGCCTGCT GCTGGTGGTC AGCGCCAGCG CGGCCTGGGT GATTCGTCAG
GTCATGAGCA ATGTCCGCGG CGTCATCGGA TCGCTCAAGA CCATTGCCAG CGGCGATGGC
GACCTGACCC GCCGCGTGCA GGTCGACTCC TCAGACGAAA TCGGCGAGAT GATCGGCCTG
TTCAACGGTT TGCTGGACAG CCTGCAAGGC ACCTTGCGCC AGGTCATCGA AACCGCAGCG
CCCCTGGAGC AGATGTCCCG CGAACTGCAC CGGCTCACCC AGGGCGCGGA GGACAGTGCG
CGCTCACAGC AAGAGCGCAC CGAGTCCATC AGCCGTGACA TAGACACCAT GACCAATAGC
ATTCAGGAAG TGGCGCAGCG CTCCGAGCAG GCCTCCGAGC AAGCCAGCGC CGCGGCGCGT
CAAGCGAACG AAGCCAGGCA TAACATCGAC AGCCTGTCCT TGAGCATCGG CGACCTGGGC
AACAGCGTGC TCAGCTCGGT GCAGGCCATG GAACAACTGG AAGCAGAAAC CCAGCACGTC
GGCTCGGTGC TGACGGTGAT CCGCAGCATC GCCGAACAGA CCAACCTGCT CGCCCTGAAC
GCCGCCATCG AAGCGGCACG GGCTGGCGAG CAAGGGCGGG GCTTTGCCGT GGTCGCCGAT
GAGGTGCGCA ACCTGGCCCA GAAAACGACC GCTTCCACCG CGCAGATCCA AGACATCATC
CAGCGCCTGC AAAACAGCGC CAGCAGTGTC TTGCACGCGA TGAACCTGAA CGGCGAAAAG
GCCAGGTCAA GCATTCAGCG CTCTGAACAT GCCACGCAGA CCCTGGAGGC GATTACCGGG
GCCGTTCGCC AGATCGATGA GTTAAACGCC GGCATCGCCC GTTTCACCAA CGAGCAGATC
GGCCTTTCCC GTTCGATCCA GCAAGACACC GAGAGGCTGC AACAGGACAC CCAGGCCACC
ACCCAAGGTG CCGACGCCAC CGCACGGCTC GGCGAGCAAT TGGTCGGTAC GGGCAACCAC
CTTCGCAGCG CCACCGCTCA GTTTCGCATT TGA
 
Protein sequence
MPFVPTRPAQ PMFKNIPLTL KLFLPPAIAL FGMLLFVGYT AVQLDDNDNR LVSLEKQRYP 
TLEAADNVIF QFSRLPGLLN SAVAAGERDT LDEASDVLAD VHARLRDLEP LTAERADRHR
EIQAWSAAIK RYADNAFASS GQLLDGAAFD DLRPHFDRMA SDLKNAQALG EQFRSHAYAD
FQSSLTQVRA DNATTTRVGY LLSFCLLLVV SASAAWVIRQ VMSNVRGVIG SLKTIASGDG
DLTRRVQVDS SDEIGEMIGL FNGLLDSLQG TLRQVIETAA PLEQMSRELH RLTQGAEDSA
RSQQERTESI SRDIDTMTNS IQEVAQRSEQ ASEQASAAAR QANEARHNID SLSLSIGDLG
NSVLSSVQAM EQLEAETQHV GSVLTVIRSI AEQTNLLALN AAIEAARAGE QGRGFAVVAD
EVRNLAQKTT ASTAQIQDII QRLQNSASSV LHAMNLNGEK ARSSIQRSEH ATQTLEAITG
AVRQIDELNA GIARFTNEQI GLSRSIQQDT ERLQQDTQAT TQGADATARL GEQLVGTGNH
LRSATAQFRI