| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2558 |
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| Symbol | |
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| ID | 1045915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2906021 |
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| End bp | 2907379 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145981 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | NP_744703 |
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| Protein GI | 26989278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.431388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.101058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGGACGC CGCGTTCAAG GAGCAATGAC ATGAAACGCC CATGCCTGAT GGTGTGCCTG
CTGGGAGTTG CCGTACAGGC CAGTGCCATG GACCTGAAGC AAGCCTGGGA CCTGTTGCAG
TACCAGGGCC CGATCTACCG CGCTGCCGTG CATGAAAAAC AAGCCGGTGG CGAAAACCGC
GCCATCGGCG AGGCCGGCCT GCTGCCGCAG ATCAACGCCT CGGCCTACTT CAACCAGGTC
AATGGCAGCC AGCGCCAGAA TGGCCAGGAC AATGACCTCG ACTATGACTC CAAGGGCGCC
AACGTGCGCC TGCGCCAGCC GTTGTTCAAC AAACAGAAGA TGGCCGAGTA CCGCCAGGGC
CAGCAACGAG CCGACTACAG CGTGGCGGTG TTCGACGCCA AGAGCCAGGA CGCAGCGGTG
CGCCTGGCCG ACGCTTACTT CGACGTGCTG CTGGCCAGCG AAACCATCAC CCTGGCCAAG
GCCAAGCTGA GCGCTTTCGA AGAACAGCTG GCATCGGCGA AGCGGCGCAT GGAACTGGGC
GCCGGCACCA TCACCGACGT CGACGAGTCG GTGGCCCGCC GCGACCTGGC CGAGGCCGAC
CTGATCGACG CCCAGGACAA CCTGGTCAAT GCCCGGCGCA AGCTGGAGGA ATACATTGGT
GAAACCCCGC AGGCGTTGAC CACCCTGCAG GCGGGCTTCA GCACCCCGCC GCTGATGCCG
GGCAACCTGC AGGAGTGGCT GGTCAAGGCC CAGGCTGACA GCCCACTGAT TCATGCACGC
CGGCACAGCT ACGCGCTGGC CGAGGAAGAA GTCAACCGCG CCCGCTCCGG GCATTACCCG
ACCTTGGATT TCGTGGCGGG TTACACCGCG GGCAGCAGCC AGTCGATTTC CGAGCTGAAC
CAGCGCAACC ACTACAGCTC GATCGGGCTG GAGCTGAACA TCCCGCTGTA CAGCGGTGGC
AGCACCAGTG CCCTGTCCCG CCAGGCCAGC GCCAACAGTT CCAAGGCCCT GGATGAGCTG
GACGCCACTC GCCAGGAGGT GATTTCCAAC ACGACCCGCG AATACCGTGG CGTGCAGAGT
GGCGCCCTGC GCATTCAGGC ACTGGAAAAG GCCGTGGCCT CCAACGAGCG TTCGCTGACC
TCGACCCGCA AGGGCTTCAA GGAAGGTGGT ACCAGCACCA ACTCGGATGT GCTCAATGCC
GAGGAGCTGC TGTATGACGC CCGCCATGAC CTGTTCGAGG CCAAGCTCAA CTACCTGATG
TCGCGCCTGC GGCTGGCCTC GTCGGTGGGC AGCCTGGGGG ATGATGATAT CGAGCAGATC
AATGATTACC TGGGGCCGGA GCTGATAGTC AGCAATTGA
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| Protein sequence | MWTPRSRSND MKRPCLMVCL LGVAVQASAM DLKQAWDLLQ YQGPIYRAAV HEKQAGGENR
AIGEAGLLPQ INASAYFNQV NGSQRQNGQD NDLDYDSKGA NVRLRQPLFN KQKMAEYRQG
QQRADYSVAV FDAKSQDAAV RLADAYFDVL LASETITLAK AKLSAFEEQL ASAKRRMELG
AGTITDVDES VARRDLAEAD LIDAQDNLVN ARRKLEEYIG ETPQALTTLQ AGFSTPPLMP
GNLQEWLVKA QADSPLIHAR RHSYALAEEE VNRARSGHYP TLDFVAGYTA GSSQSISELN
QRNHYSSIGL ELNIPLYSGG STSALSRQAS ANSSKALDEL DATRQEVISN TTREYRGVQS
GALRIQALEK AVASNERSLT STRKGFKEGG TSTNSDVLNA EELLYDARHD LFEAKLNYLM
SRLRLASSVG SLGDDDIEQI NDYLGPELIV SN
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