Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2428 |
Symbol | |
ID | 1045555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2775651 |
End bp | 2776877 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637145851 |
Product | sugar efflux transporter |
Protein accession | NP_744576 |
Protein GI | 26989151 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0595849 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGCGG AGAAGCGGTT TCCACCCATG AACGGACCCA TACCCACACA CCTGCCGCCC ACAACGGGCA GCGGCAGCTG GCTGAGCGTC ATCGCCCTGG CCTTGGCGGC CTTCATTTTC AACACCACCG AGTTCGTCCC GGTGGCCCTG CTCAGTGACA TTGGCCGCAG CTTCGACATG AGCACTGCCC AGGTCGGCCT GATGCTGACC ATCTACGCCT GGATCGTGGC ACTGGCCTCG TTGCCCATGA TGTTGCTGAC CCGCAACATC GAACGGCGGC GTCTGCTGCT GTTCGTGTTC CTGGTGTTCA TTGTCAGCCA CTTGCTGTCC TGGCTTTCGC AAAGCTTCGC CATGCTGCTG GTCAGCCGCA TCGGCATTGC CCTGGCGCAT GCGGTGTTCT GGTCCATCAC CGCCTCGCTG GCGGTGCGTG TGGCGCCGCC GGGCCAGCAG GCCAAGGCGC TGGGCCTGCT GGCCACCGGT ACTACCCTGG CCATGGTCCT GGGCATCCCG CTGGGCCGTG TGGTGGGCGA GGCACTGGGC TGGCGTATCA CGTTCCTGAG CATTGCCGGG GTAGCGCTAG CCACCATGCT TTGCCTGATC AAATCGCTGC CGCTGCTGCC CAGCCAGAAC TCCGGTTCGT TGCGCAGCCT GCCGGTCCTG TTCAAGCGCC CGGCACTGGT CATTACCTAC TTGCTGGTGA CGCTGGTCAT TACCGCGCAG TTCACGGCCT ACAGCTATAT CGAGCCGTTC GCCCTGCACG TAGCGCAGAT CGGCGGCGAC CGCACCACGC TGTTGCTGCT GTTGTTCGGC GGTGCCGGGG TTTTTGGTTC ATTGTTGTTC AGCCGTTACA GCGAACGCTT CCCGCATGGC TTCCTGGTAG GTTCGATCGG GGTACTCGCC GCGTGCCTGT TGCTGATGTT GCCGCTGTCG GGCAACTTCT ATGTGTTTGC AGTGCTGAGC ATGTTCTGGG GCGTGGCAAT TCTCAGCTTC AGCCTGGCGC TGCAGTCCAA GACCCTGAAG CTGGCGTCCG ACGCCACCGA TGTGGCCATG GCGCTGTTCT CGGGTATCTA CAACATCGGC ATTGGCGGTG GTGCGCTGCT GGGCAGTATC GTCAGCAGCC AGATGGATGT GGCGGATATC GGCCTGGTGG GCGGCAGCGT GGCAGTGGTC GGGCTGGTAC TGGCCGTTGC CAGTACCCGG CGCTTTCGCG AGGCGTTGAC ACGTTGA
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Protein sequence | MSAEKRFPPM NGPIPTHLPP TTGSGSWLSV IALALAAFIF NTTEFVPVAL LSDIGRSFDM STAQVGLMLT IYAWIVALAS LPMMLLTRNI ERRRLLLFVF LVFIVSHLLS WLSQSFAMLL VSRIGIALAH AVFWSITASL AVRVAPPGQQ AKALGLLATG TTLAMVLGIP LGRVVGEALG WRITFLSIAG VALATMLCLI KSLPLLPSQN SGSLRSLPVL FKRPALVITY LLVTLVITAQ FTAYSYIEPF ALHVAQIGGD RTTLLLLLFG GAGVFGSLLF SRYSERFPHG FLVGSIGVLA ACLLLMLPLS GNFYVFAVLS MFWGVAILSF SLALQSKTLK LASDATDVAM ALFSGIYNIG IGGGALLGSI VSSQMDVADI GLVGGSVAVV GLVLAVASTR RFREALTR
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