| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2403 |
|---|
| Symbol | ompR-2 |
|---|
| ID | 1045530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2747762 |
|---|
| End bp | 2748502 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637145826 |
|---|
| Product | winged helix family two component transcriptional regulator |
|---|
| Protein accession | NP_744551 |
|---|
| Protein GI | 26989126 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACACG TCGATCACAT CCTGATCGTC GACGACGACC GCGAGATCCG CGAACTGGTC
GGCAATTACC TGAAGAAGAA CGGCCTGCGC ACCAGCATCG TTGCAGACGG CCGGCAGATG
CGCGCCTTTC TCGAAGCCAA CAGCGTCGAC CTGATCGTGC TCGACATCAT GATGCCTGGC
GACGACGGCC TGCTGTTGTG CCGCGAGCTG CGCGCCGGCA AGCACCGCAA TACGCCGGTG
CTGATGCTGA CCGCCCGCAA TGACGAAACC GACCGCATCA TCGGCCTGGA AATGGGCGCC
GACGATTACC TGACCAAACC GTTCTCGGCC CGCGAACTGC TCGCCCGCAT CAACGCCGTG
CTGCGCCGCA CACGCATGCT GCCGCCCAAC CTGACCATCA GTGAAAGCAG CCGCCTGCTG
GGTTTCGGTC AATGGCGCCT GGACACCACC GCGCGCCACC TGCTCGACAG CGAAGGCACC
CTGGTGGCCC TGAGCGGCGC CGAGTACCGC CTGCTGCGAG TGTTCCTCGA CCACCCGCAG
CGGGTGCTCA GCCGCGAACA GCTGCTTAAC CTGACCCAGG GCCGCGAAGC CGACATCTTC
GACCGCTCCA TCGACTTGCT GGTCAGCCGC CTGCGCCAGC GCCTGGGTGA CGATGCCCGC
GAGCCCAGCT GCATCAAGAC CGTGCGCAGC GAGGGCTACG TGTTTTCGCT GCCGGTGCAA
TTGCTCGAGT CCCCCTCATG A
|
|---|
| Protein sequence | MEHVDHILIV DDDREIRELV GNYLKKNGLR TSIVADGRQM RAFLEANSVD LIVLDIMMPG
DDGLLLCREL RAGKHRNTPV LMLTARNDET DRIIGLEMGA DDYLTKPFSA RELLARINAV
LRRTRMLPPN LTISESSRLL GFGQWRLDTT ARHLLDSEGT LVALSGAEYR LLRVFLDHPQ
RVLSREQLLN LTQGREADIF DRSIDLLVSR LRQRLGDDAR EPSCIKTVRS EGYVFSLPVQ
LLESPS
|
|---|
| |