Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_23SE |
Symbol | |
ID | 1045665 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1327315 |
End bp | 1330216 |
Gene Length | 2902 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640694999 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.564865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.184682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTCAAGTGA AGAAGCGCAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAAGACGTG GTAGCCTGCG ATAAGCTTTG GGGAGTCGGC AAACAGACTG TGATCCAGAG ATCTCTGAAT GGGGGAACCC AGCCAGCATA AGCTGGTTAT CTTGTACTGA ATACATAGGT GCAAGAGGCG AACCAGGGGA ACTGAAACAT CTAAGTACCC TGAGGAAAAG AAATCAACCG AGATTCCCTT AGTAGTGGCG AGCGAACGGG GACCAGCCCT TAAGTTGATT TGAGATTAGT GGAACGCTCT GGAAAGTGCG GCCATAGTGG GTGATAGCCC CGTACACGAA AATCTCTTGT CAATGAAATC GAGTAGGACG GAGCACGAGA AACTTTGTCT GAATATGGGG GGACCATCCT CCAAGGCTAA ATACTACTGA CTGACCGATA GTGAACCAGT ACCGTGAGGG AAAGGCGAAA AGAACCCCGG AGAGGGGAGT GAAATAGAAC CTGAAACCGT ATGCGTACAA GCAGTGGGAG CCTACTTTGT TAGGTGACTG CGTACCTTTT GTATAATGGG TCAGCGACTT ATATTCAGTG GCGAGCTTAA CCGAATAGGG GAGGCGTAGC GAAAGCGAGT CTTAATAGGG CGTTTAGTCG CTGGGTATAG ACCCGAAACC GGGCGATCTA TCCATGGGCA GGTTGAAGGT TAGGTAACAC TGACTGGAGG ACCGAACCGA CTACCGTTGA AAAGTTAGCG GATGACCTGT GGATCGGAGT GAAAGGCTAA TCAAGCTCGG AGATAGCTGG TTCTCCTCGA AAGCTATTTA GGTAGCGCCT CATGTATCAC TGTAGGGGGT AGAGCACTGT TTCGGCTAGG GGGTCATCCC GACTTACCAA ACCGATGCAA ACTCCGAATA CCTACAAGTG CCGAGCATGG GAGACACACG GCGGGTGCTA ACGTCCGTCG TGAAAAGGGA AACAACCCAG ACCGTCAGCT AAGGTCCCAA AGTCATGGTT AAGTGGGAAA CGATGTGGGA AGGCTTAGAC AGCTAGGAGG TTGGCTTAGA AGCAGCCACC CTTTAAAGAA AGCGTAATAG CTCACTAGTC GAGTCGGCCT GCGCGGAAGA TGTAACGGGG CTCAAACCAT GCACCGAAGC TACGGGTATC ATCTTATGAT GATGCGGTAG AGGAGCGTTC TGTAAGCCTG TGAAGGTGAG TTGAGAAGCT TGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GACAATGCGA GTGAAAAACT CGCACGCCGA AAGACCAAGG TTTCCTGCGC AACGTTAATC GACGCAGGGT TAGTCGGTCC CTAAGGCGAG GCTGAAAAGC GTAGTCGATG GAAAACAGGT TAATATTCCT GTACTTCCAG TTATTGCGAT GGAGGGACGG AGAAGGTTAG GCCAGCCTGG CGTTGGTTGT CCAGGTTTAA GGTGGTAGGC TGAAATCTTA GGCAAATCCG GGATTTCAAG GCCGAGAGCT GATGACGAGT TGCCTTCAGG CGACGAAGTG GTTGATACCA TGCTTCCAAG AAAAGCTCCT AAGCTTCAGA TAACTGGGAA CCGTACCCCA AACCGACACA GGTGGTTAGG TAGAGAATAC CAAGGCGCTT GAGAGAACTC GGGTGAAGGA ACTAGGCAAA ATGGCACCGT AACTTCGGGA GAAGGTGCGC CGGCGAGGGT GAAGGACTTG CTCCGTAAGC CCATGCCGGT CGAAGATACC AGGCCGCTGC GACTGTTTAT TAAAAACACA GCACTCTGCA AACACGAAAG TGGACGTATA GGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATGG GGTTAGCGCA AGCGAAGCTC TTGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCGGCGCT GTCTCCACCC GAGACTCAGT GAAATTGAAA TCGCTGTGAA GATGCAGTGT ATCCGCGGCT AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTTGCAC TGGACTTTGA ATTTGCTTGT GTAGGATAGG TGGGAGGCTT TGAAGTGGGG ACGCCAGTTC TCATGGAGCC ATCCTTGAAA TACCACCCTG GCAACTTTGA GGTTCTAACT CAGGTCCGTT ATCCGGATCG AGGACAGTGT ATGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GTACGAAGGT GCGCTCAGAC CGGTCGGAAA TCGGTCGTAG AGTATAAAGG CAAAAGCGCG CTTGACTGCG AGACAAACAC GTCGAGCAGG TACGAAAGTA GGTCTTAGTG ATCCGGTGGT TCTGTATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GCCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTTAGAAC GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGACGTTTG AGATTTGAGA GGGGCTGCTC CTAGTACGAG AGGACCGGAG TGGACGAACC TCTGGTGTTC CGGTTGTCAC GCCAGTGGCA TTGCCGGGTA GCTATGTTCG GAAGAGATAA CCGCTGAAAG CATCTAAGCG GGAAACTTGC CTCAAGATGA GATCTCACTG GGATCTTGAA TCCCCTAAAG GGCCGTCGAA GACTACGACG TTGATAGGTT GGGTGTGTAA GCGCTGTGAG GCGTTGAGCT AACCAATACT AATTGCCCGT GAGGCTTGAC CATATAACAC CC
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Protein sequence | |
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