Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2392 |
Symbol | |
ID | 1045428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2729392 |
End bp | 2730594 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145815 |
Product | major facilitator family transporter |
Protein accession | NP_744540 |
Protein GI | 26989115 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.110299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCGAC GTGGTTGCAG ACCATCGAGA TGGGGATGTC ATAGGCTTGC TCGGGATGCT CCTGGCGCAG CGGCCAGGTT TCCAGCTTGC CGTTGCTGGG GAAGCGATAA TGCAGGCAGG TATGCGCCGG CGGGTCTGCT CGACCAGATC GCCGATGGCA TGCACATCAG CCAGGCCATG GCTGGGCAAT GGGTCACGGC GTATGCCTTG GGCTCGTTAC TGACCGCCAT CCCGTTGGTG ACGTTGACCC AAGGCTGGTA TCGGCGCCGG GCGCTGTTGC TGGCGATCAT CGGCTTCGTG CTGTTCAACG GGCTGACGGC CTTGTCGAAC TCCAACACGC TGACCCTGGT GCTGCGCTTT TTCACGGGGG CTGCGGCCGG CCTGGCATGG GGCCTGATTG CTGGCCATGC CCGGCGCATG GTGCCGGTGC CGTTGCAGGG CCGGGCCATG GCGCTGGCCA TGCTTGGGCA GCCGATTGCC TTGTCGCTCG GCTTGCCGAT TGCGACATGG CTGGGAGCGG GGCTGGGCTG GCGCGCGACG TTCGTGGTCG TCACGCTGGT GGCGTCGCAG CTGGTGGTGT GGGTGTTGCG ATCCGTGCCG GACTACCCGG GGCAGGCTGC CGGCAAGCGC CCGGCGGCCA TGCAGGTATT GCGCACGCCA GGGGTGTTGA TCGTATTGCT GGTGATCCTC ACCTGGATCC TTGGCCATAA CATTCTCTAC ACCTATATCG TGCCGTTGCT GGCGGCGGCT GGCATGGCTG CGGACATTGG CCCGGTGCTG ATGGTGTTTG GTCTGTCGGC GCTGGCCGGG ATCGGCCTGG TAGGGCTGCT GGTCGACCGG CACCTGCGCA AGCTGGTGTT GCTGAGCCTG GCCGGTTTTG CCTTGGCCAC GCTGGCATTG GGGCAGGCAT CGTCGTGGCT TGTGTACCTG AGCATCGCCT TGTGGGGAAT GACCTATGGC GGCGCCCCGA CCCTGCTGCA GACAGCGTGC GCCGACGCCG CAGGCCAGGG TGGTGATGTG GCGCAGTCGA TGCTGGTGAC GGTGTGGAAC TGCGCCATTG CTCTGGGCGG AATCATTGGC GGATTGTTGC TGGCTGGGGC CGGCGTGGCG TGGTTTGGCG GGGTAGTGCT GGGGTTGATC GCCTTGGCCT GGCTGCTGGC CGTGGCCGGG CGGGGAAGCG GTTTTGTGGC GGGGAGGCGC TAA
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Protein sequence | MFRRGCRPSR WGCHRLARDA PGAAARFPAC RCWGSDNAGR YAPAGLLDQI ADGMHISQAM AGQWVTAYAL GSLLTAIPLV TLTQGWYRRR ALLLAIIGFV LFNGLTALSN SNTLTLVLRF FTGAAAGLAW GLIAGHARRM VPVPLQGRAM ALAMLGQPIA LSLGLPIATW LGAGLGWRAT FVVVTLVASQ LVVWVLRSVP DYPGQAAGKR PAAMQVLRTP GVLIVLLVIL TWILGHNILY TYIVPLLAAA GMAADIGPVL MVFGLSALAG IGLVGLLVDR HLRKLVLLSL AGFALATLAL GQASSWLVYL SIALWGMTYG GAPTLLQTAC ADAAGQGGDV AQSMLVTVWN CAIALGGIIG GLLLAGAGVA WFGGVVLGLI ALAWLLAVAG RGSGFVAGRR
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