| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2375 |
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| Symbol | metH |
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| ID | 1045407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2711393 |
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| End bp | 2715100 |
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| Gene Length | 3708 bp |
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| Protein Length | 1235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637145799 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | NP_744524 |
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| Protein GI | 26989099 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GCAGCGCTCG TCTCCAAGCA CTCCAGAACG CACTCAAAGA GCGCATCCTG
ATCCTCGACG GCGGCATGGG TACTATGATC CAAAGCTACC GCCTGGAGGA ACACGACTAT
CGTGGCACGC GTTTTGCCGA TTGGCCAAGC GATGTGAAGG GTAACAACGA CCTTTTGCTG
CTCAGCCGCC CGGACGTGAT CGCCGCCATC GAGAAGGCCT ACCTGGATGC CGGTGCCGAT
ATTCTCGAAA CCAACACCTT CAACGCCACG CAGATTTCCC AGGCCGACTA CGGCATGGAG
TCGCTGGTTT ACGAGTTGAA CGTCGAAGGC GCGCGCATCG CTCGCCAGGT TGCCGATGCC
AAGACCCTGG AGACGCCGGA CAAGCCGCGC TTCGTTGCCG GCGTGCTCGG CCCTACCAGC
CGAACCTGCT CGATTTCCCC GGACGTCAAC GACCCAGGGT TTCGCAACGT CACCTTCGAC
GAGTTGGTAG AAAACTACAT CGAGGCCACC CGCGGCCTGA TCGAAGGCGG CGCCGACCTG
ATCCTGATCG AAACCATCTT CGACACCCTC AACGCCAAGG CGGCGATCTT CGCCGTGCAG
CAAGTGTTCG AGGACGACAA CGTCGAACTG CCGATCATGA TCTCCGGCAC CATCACCGAC
GCCTCCGGTC GTACCCTGTC GGGCCAGACC ACCGAAGCGT TCTGGAACTC GGTGCGTCAC
GCCAAGCCGA TTTCCGTGGG CCTGAACTGC GCCCTCGGCG CCAAGGACCT GCGCCCGTAT
TTGGAAGAGC TGGCCACCAA GGCCGATACC CACGTGTCCG CCCACCCCAA CGCCGGCCTG
CCGAACGCCT TCGGCGAGTA CGACGAAACC CCGGCCGAGA TGGCCGCGGT GGTCGAAGAA
TTCGCGGCCA GCGGCTTCCT CAACATCATT GGCGGCTGCT GCGGCACCAC GCCGGGGCAC
ATCCAGGCCA TTGCCGAAGC CGTGGCCAAG TACAAGCCGC GCGAGATCCC GGAAATCGCC
AAGGCCTGCC GCCTGTCGGG CCTGGAGCCG TTCACCATCG ACCGCCAGTC GCTGTTCGTC
AACGTCGGTG AGCGCACCAA CATCACCGGT TCCGCCAAGT TCGCCAGGCT GATCCGCGAA
GAGAACTATA CCGAAGCCCT GGAAGTCGCC CTGCAGCAGG TCGAGGCCGG CGCCCAGGTA
ATCGACATCA ACATGGACGA AGGGATGCTC GACTCCCAGG CGGCCATGGT CCGGTTCCTC
AACCTGATCG CGGGTGAGCC GGACATTTCG CGCGTACCGA TCATGATCGA CTCGTCCAAG
TGGGAAGTGA TCGAAGCCGG CCTCAAGTGC ATCCAGGGCA AGGGCATCGT CAACTCCATT
TCCATGAAGG AAGGCGTCGA GCAGTTCAAG CACCACGCCC GCCTGTGCAA GCGCTATGGC
GCTGCCGTGG TGGTCATGGC CTTCGACGAA GTCGGCCAGG CCGACACAGC CGCGCGCAAG
AAGGAAATCT GCCAGCGCAG CTATGACATC CTGGTCAACG AAGTGGGCTT CCCGCCAGAA
GACATCATCT TCGACCCGAA CATCTTTGCC GTCGCCACCG GTATCGAAGA GCACAACAAC
TACGCCGTCG ACTTCATCGA GGCCTGTGCC TATATCCGCG ACCACCTGCC CCACGCCCTG
AGCTCAGGTG GTGTGTCCAA CGTGTCGTTC TCGTTCCGTG GCAACAACCC GGTGCGTGAA
GCGATCCACT CGGTGTTCCT GTATCACGCG ATCCAGAACG GCCTGACCAT GGGTATCGTC
AACGCCGGCC AGCTGGAGAT CTACGACGAG ATCCCGGCCC AGCTGCGTGA AAAGGTCGAG
GACGTGGTAC TCAACCGCAC CCCGCATGGC ACCGATGCAC TGCTGGCCAT CGCCGACGAC
TACAAGGGTG GCGGCGCAAC CAAGGAAGTG GAAAACGAAG AGTGGCGCTC GCTGCCGGTG
GAAAAACGCC TGGAGCACGC GCTGGTCAAG GGCATCACCG CGTTCATCGT CGAAGACACC
GAAGCATGCC GCCAGCAGTG CGCGCGCCCC ATCGAAGTGA TCGAAGGCCC GCTGATGAAC
GGCATGAACG TGGTCGGCGA CCTGTTCGGC GCGGGTAAAA TGTTCCTGCC GCAGGTGGTC
AAGTCGGCCC GCGTCATGAA ACAGGCCGTT GCTCACCTGA TCCCGTTCAT CGAAGCCGAA
AAAGGCGACA AGCCGGAAGC CAAGGGCAAG ATCCTGATGG CCACGGTGAA AGGCGACGTG
CACGACATCG GCAAGAACAT TGTCGGCGTG GTGCTGGGCT GTAACGGATA CGACATCGTC
GACCTTGGCG TGATGGTACC GGCGGAGAAG ATCCTGCAAA CGGCCCGCGA GCAGAAGTGC
GACATCATCG GCCTGTCCGG CCTGATTACC CCGTCGCTGG ACGAAATGGT CCACGTTGCC
CGCGAAATGC AGCGCCAGGG CTTCGAACTG CCGCTGATGA TCGGTGGCGC CACCACCTCC
AAGGCGCACA CTGCAGTCAA GATCGAGCCC AAGTACAGCA ACGACGCGGT CATCTACGTC
ACCGACGCTT CGCGCGCGGT CGGCGTGGCC ACCCAGTTGC TGTCCAAAGA ACTCAAGCCA
GGCTTCGTCG AGAAGACCCG CCTGGAATAC GTGGACGTGC GTGAGCGTAC CGCCAACCGC
AGCGCCCGCA CCGAACGCCT CAGCTACGCC CAGGCGATCG CCGCCAAGCC GCAGTACGAC
TGGGCCGGCT ACCAGCCGAC GGCGCCCTCC TTCACCGGCG TCAAGGTGCT GGAGGACATC
GATTTGCGCA CCCTGGCCGA GTACATCGAC TGGACGCCGT TCTTCATCTC CTGGGACCTG
GCCGGCAAGT TCCCGCGCAT CCTCACCGAC GAGGTGGTTG GCGAGGCCGC CACGGCGCTG
TACAAGGATG CCCGCGAGAT GCTCGACAAG CTGATCGATG AGAAGCTGAT CAGCGCTCGC
GCGGTATTCG GCTTCTGGCC GGCCAACCAG GTGGACGATG ACGACATCGA AGTCTACGGC
GAAGACGGCC AGGCACTGGC CACCCTGCAT CACCTGCGCC AGCAGACCAT CAAGCCGGAC
GGCAAGCCCA ACTGGTCGCT GGCCGACTTC GTCGCACCGA AAGACAGTGG CGTTACCGAC
TACGTAGGTG GTTTCATCAC CACCGCCGGC ATCGGTGCCG AGGAAGTGGC CAAGGCTTAC
CAGGACAAGG GCGACGACTA CAGCTCGATC ATGGTCAAGG CACTGGCCGA CCGCCTGGCC
GAAGCCTGTG CCGAATGGCT GCACGAGCAG GTGCGTAAAG AGCACTGGGG CTATGCCCGC
GACGAGCACC TGGACAACGA GGCGCTGATC AAGGAACAGT ACAGCGGCAT CCGCCCTGCG
CCGGGTTATC CGGCCTGCCC CGACCACACT GAAAAGGAAA CTCTGTTCCG CCTGCTCGAT
GGCACCGCCA TCGGTGAAAC CGGGCCGAGC GGGGTGTACC TCACCGAGCA CTTCGCGATG
TTCCCGGCGG CGGCGGTCAG CGGCTGGTAC TTCGCCCACC CGCAGGCGAA GTATTTTGCC
GTAGGCAAGG TCGACAAGGA CCAGATCGAG CGTTACAGCG CACGCAAAGG CCAGGATATC
AGCGTGAGCG AGCGCTGGCT GGCGCCTAAC CTGGGGTATG ACAGCTAA
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| Protein sequence | MSDRSARLQA LQNALKERIL ILDGGMGTMI QSYRLEEHDY RGTRFADWPS DVKGNNDLLL
LSRPDVIAAI EKAYLDAGAD ILETNTFNAT QISQADYGME SLVYELNVEG ARIARQVADA
KTLETPDKPR FVAGVLGPTS RTCSISPDVN DPGFRNVTFD ELVENYIEAT RGLIEGGADL
ILIETIFDTL NAKAAIFAVQ QVFEDDNVEL PIMISGTITD ASGRTLSGQT TEAFWNSVRH
AKPISVGLNC ALGAKDLRPY LEELATKADT HVSAHPNAGL PNAFGEYDET PAEMAAVVEE
FAASGFLNII GGCCGTTPGH IQAIAEAVAK YKPREIPEIA KACRLSGLEP FTIDRQSLFV
NVGERTNITG SAKFARLIRE ENYTEALEVA LQQVEAGAQV IDINMDEGML DSQAAMVRFL
NLIAGEPDIS RVPIMIDSSK WEVIEAGLKC IQGKGIVNSI SMKEGVEQFK HHARLCKRYG
AAVVVMAFDE VGQADTAARK KEICQRSYDI LVNEVGFPPE DIIFDPNIFA VATGIEEHNN
YAVDFIEACA YIRDHLPHAL SSGGVSNVSF SFRGNNPVRE AIHSVFLYHA IQNGLTMGIV
NAGQLEIYDE IPAQLREKVE DVVLNRTPHG TDALLAIADD YKGGGATKEV ENEEWRSLPV
EKRLEHALVK GITAFIVEDT EACRQQCARP IEVIEGPLMN GMNVVGDLFG AGKMFLPQVV
KSARVMKQAV AHLIPFIEAE KGDKPEAKGK ILMATVKGDV HDIGKNIVGV VLGCNGYDIV
DLGVMVPAEK ILQTAREQKC DIIGLSGLIT PSLDEMVHVA REMQRQGFEL PLMIGGATTS
KAHTAVKIEP KYSNDAVIYV TDASRAVGVA TQLLSKELKP GFVEKTRLEY VDVRERTANR
SARTERLSYA QAIAAKPQYD WAGYQPTAPS FTGVKVLEDI DLRTLAEYID WTPFFISWDL
AGKFPRILTD EVVGEAATAL YKDAREMLDK LIDEKLISAR AVFGFWPANQ VDDDDIEVYG
EDGQALATLH HLRQQTIKPD GKPNWSLADF VAPKDSGVTD YVGGFITTAG IGAEEVAKAY
QDKGDDYSSI MVKALADRLA EACAEWLHEQ VRKEHWGYAR DEHLDNEALI KEQYSGIRPA
PGYPACPDHT EKETLFRLLD GTAIGETGPS GVYLTEHFAM FPAAAVSGWY FAHPQAKYFA
VGKVDKDQIE RYSARKGQDI SVSERWLAPN LGYDS
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