| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2358 |
|---|
| Symbol | |
|---|
| ID | 1045384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 2691282 |
|---|
| End bp | 2691818 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637145782 |
|---|
| Product | spore coat U domain protein |
|---|
| Protein accession | NP_744507 |
|---|
| Protein GI | 26989082 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5430] Uncharacterized secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.488322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA CTTCGATCCT GTTGCTCACC CTCGGCCCGC TGCTGGTCCC CGGCGGTGCG
GTGCATGGCA GCACCACCGG TTTCATCCAG GCGCGGCTGG TGATCAGCGC GTCTTGCCAG
ATCAGCAGCA ACGAGACGCA ACCGGCCGTG CTGGGTGACC CAGGCGTACT GGACTTTGGC
GAGCGCGGTC CGAACTGGGA CCAGCCGTTG CGCAGCCAGG TGGACGAAGT GGGCGGTCAG
GGTAGCCTGC AGATCAGTTG CACGCCTGAG GTTCGGGCCT TCAACGTGCG TATCAATGGT
GGCCTCAATG GCGATGATGG CATTCGCCGC TTGAGCAACG GCCGTGAACT GATTCCATAC
CAGCTGGCGG TTGACCCAGG CGGCAACAGC CGCTACGGCG TCGGCCAGGC ACGGGCCTTC
ACCATTAGCA GCAGCCAGCA AGTACCGATT CCCATCTACG GTGTGGTAGT GGCGCAACCG
CGTGCGCTGC CGGCCGGGCT TTACCGCGAC ACCCTCAGAG TGACCCTGGA CTGGTAA
|
|---|
| Protein sequence | MSRTSILLLT LGPLLVPGGA VHGSTTGFIQ ARLVISASCQ ISSNETQPAV LGDPGVLDFG
ERGPNWDQPL RSQVDEVGGQ GSLQISCTPE VRAFNVRING GLNGDDGIRR LSNGRELIPY
QLAVDPGGNS RYGVGQARAF TISSSQQVPI PIYGVVVAQP RALPAGLYRD TLRVTLDW
|
|---|
| |