Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2337 |
Symbol | |
ID | 1045336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2666789 |
End bp | 2667979 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145760 |
Product | hypothetical protein |
Protein accession | NP_744486 |
Protein GI | 26989061 |
COG category | [S] Function unknown |
COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.634826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000401834 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACATG TACCCCAGAT CAAAATCCCC GCCACCTACA TCCGCGGCGG CACCAGCAAA GGCGTGTTCT TCCGCCTGCA AGACCTGCCC GAGCAGGCGC AAATTCCAGG TCCCGCCCGC GATGCGCTGC TGCTGCGGGT AATCGGCAGC CCCGACCCTT ACGGCAAGCA GATCGACGGC ATGGGCGGCG CCACGTCGAG CACCAGCAAG ACCGTGATCC TGTCGCAAAG CATCAAGCCC GAGCACGATG TCGACTACCT GTTCGGCCAG GTCAGCATCG ACAAGGCCTT CGTCGACTGG AGCGGCAACT GCGGCAACCT GTCCGCTGCG GTCGGTTCGT TTGCCATCAG CAGTGGCCTG GTCGACCCGG CGCGTGTTCC GCGCAACGGT ATCGCCACCG TGCGTATCTG GCAGGCGAAT ATCGGCAAGA CCATCATCGC CCACGTCCCG ATCACTGAAG GTGAAGTGCA GGAAACCGGC GACTTCGAGC TGGACGGGGT CACCTTCCCG GCGGCCGAGG TGCAGCTGGA GTTTCTTGAC CCTGCAGCCG ATGAAGACGG CGGTGGCGGT GCCATGTTCC CCACCGGCAA TCTGGTCGAT GACCTGGAAG TGCCGGGGGT CGGTACGTTC AAGGCGACCT TGATCAATGC CGGTATCCCG ACCATTTTTG TCAATGCTGC CGATATCGGC TACACCGGTA CCGAACTGCA GGACGCCATC AACGGCGATC CGCAGGCGCT GCTGCGCTTC GAGACCATTC GCGCCTATGG CGCCGTGCGC ATGGGGCTTA TCGACAACGT CGACCAGGCT GCCGGGCGTC AGCACACGCC GAAAGTGGCG TTCGTCGCGC CGCCGAGCAC CTACACTGCC TCCAGTGGCA AGGCGGTGCC GGCCGGTGAG ATCGACCTGC TGGTGCGGGC CTTGTCGATG GGCAAGCTGC ACCATGCCAT GATGGGTACG GCTGCGGTGG CAATTGGCAC TGCGGCGGCC ATTCCGGGCA CGCTGGTCAA CCTCGCCGCT GGCGGAGGCG AGCGCAGCGC TGTGCGTTTC GGTCATCCTT CGGGCACCCT GCGGGTCGGG GCCGAAGCAC GCCAGGTGAA TGGTGAGTGG ACGGTAACCA AGGCAATCAT GAGCCGTAGT GCTCGCGTGC TGATGGAGGG CTGGGTTCGC GTGCCTGGCG ATAGCTTCTA A
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Protein sequence | MSHVPQIKIP ATYIRGGTSK GVFFRLQDLP EQAQIPGPAR DALLLRVIGS PDPYGKQIDG MGGATSSTSK TVILSQSIKP EHDVDYLFGQ VSIDKAFVDW SGNCGNLSAA VGSFAISSGL VDPARVPRNG IATVRIWQAN IGKTIIAHVP ITEGEVQETG DFELDGVTFP AAEVQLEFLD PAADEDGGGG AMFPTGNLVD DLEVPGVGTF KATLINAGIP TIFVNAADIG YTGTELQDAI NGDPQALLRF ETIRAYGAVR MGLIDNVDQA AGRQHTPKVA FVAPPSTYTA SSGKAVPAGE IDLLVRALSM GKLHHAMMGT AAVAIGTAAA IPGTLVNLAA GGGERSAVRF GHPSGTLRVG AEARQVNGEW TVTKAIMSRS ARVLMEGWVR VPGDSF
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