Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2313 |
Symbol | |
ID | 1045302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2643254 |
End bp | 2643691 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145736 |
Product | DoxX family protein |
Protein accession | NP_744462 |
Protein GI | 26989037 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.332195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000213237 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAACA CTACCCTCAA CGCTCTGTTC TCTACACGTG CTGGCGCTGG CTTGAGCGTT ATCCGCATCC TGGTCGGCAT CATCTTCATG GCTCATGGGG CGCAAAAACT CTTCGGCCTG TTCGGTGGCT ACGGCCTGGA AGGCACCGGC CAATGGATGG AAAGCATCGG CCTGGCGCCG GGTTACCTGA TGGCCCTATT GTCCGGTAGT GCCGAATTCT TCGGTGGCCT GGCCTTGGTG GTCGGCCTGC TGGCTCGCCC GGCGGCCCTG GCGCTGACGG TGACCTTGAT AGTGGCGATC GTTTCGGTGC ACATCGGCAA CGGCCTGTTC ATGTCCAACA ACGGCTATGA GTTCGCCCTG GCGCTGTTGG CCGGCACCGT TGCAGTCATG ATCGAAGGCG CTGGCCGCTT CTCGCTCGAC CGCCTGATCG CCCGGTAA
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Protein sequence | MNNTTLNALF STRAGAGLSV IRILVGIIFM AHGAQKLFGL FGGYGLEGTG QWMESIGLAP GYLMALLSGS AEFFGGLALV VGLLARPAAL ALTVTLIVAI VSVHIGNGLF MSNNGYEFAL ALLAGTVAVM IEGAGRFSLD RLIAR
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