| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2176 |
|---|
| Symbol | |
|---|
| ID | 1045036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2481443 |
|---|
| End bp | 2482429 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637145590 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_744325 |
|---|
| Protein GI | 26988900 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGATT GGCTGCGGTG GCGCGGGTTT CTTTACAGGC GCTCGGCGAG TAGCCTCGTG
GCTGAATCCT CCAGCCCGAC CCTGTCCATC GCCATGCCAA ACGGTTTCCC TGATTTGCCC
TCGCTCAATG CGCTACGTGT GTTCGAAGTG GTTGCCCGCC ACCTCAACTT CCGCCTGGCC
GCCGAAGAGC TGGGGGTTAC CCAGGCGGCA GTGGCACAAC AGATACGCGG GCTGGAAGCG
AGCCTGAACC TTCGTTTGTT CGAGCGCCTG CCCCGGGGCC TGGCACTGAC CGATGCGGGG
CTGGGCTACA GCGGCAGCAT TCGCAACGCC TTGGCGATGA TCGATGAGGC AACCCGCCTG
CTGCGGCCAC AGGCGTCTCA CCTGACGGTC AGCGTGACAC CAACCTTTGC CTCCAAATGG
CTCATTCCCC GGTTGGGCAG CTTTGCGCAC AGCCATCCGG ACATCGATTT ACGTGTACTG
GCCACAGATC GGCTGTCCCA CTTCAATACC GACGGCGTGA ATCTCGCAGT CCGCTATGGC
AAGCCCGACA TCGGCGCGGG CTTGAACAGC GAACTGTTGA TGGAACAGCG TATCGTCGCC
GTGGCCAGCC CAACGTTGTT CGAAGCCAGC AAAACCCCCA CCAGCTTCGA GCAGCTTCAA
GCGTTCACCC TGCTCCATGA TGCCCATGAT TTCTGGCCTC GGTTCCTGGC ACAAGTGTTC
CCGCAACACG GGCAAGCGAC TGCCAGAAAC CTGCGGTTCA ACCAGACTTC ATTGGCCATT
GATGCCGCCA TCAGTGGTCA GGGTATTGCG TTGGCAAGCC TGGCGTTCGT CAGTGATGAC
ATCGTCGCGG GCAGGCTGAC CCAGGTCTTC GCTCAGCAAC TCAGGCTCGA TAAGTCGTTC
TACCTGGTGT GGCCACGAAA GTTGCAGCAG CCGGAGTCGC TAGGCATTGT CCAGCGCTGG
TTCAAGCAAC AGGCAGGCAA TAGTTAA
|
|---|
| Protein sequence | MADWLRWRGF LYRRSASSLV AESSSPTLSI AMPNGFPDLP SLNALRVFEV VARHLNFRLA
AEELGVTQAA VAQQIRGLEA SLNLRLFERL PRGLALTDAG LGYSGSIRNA LAMIDEATRL
LRPQASHLTV SVTPTFASKW LIPRLGSFAH SHPDIDLRVL ATDRLSHFNT DGVNLAVRYG
KPDIGAGLNS ELLMEQRIVA VASPTLFEAS KTPTSFEQLQ AFTLLHDAHD FWPRFLAQVF
PQHGQATARN LRFNQTSLAI DAAISGQGIA LASLAFVSDD IVAGRLTQVF AQQLRLDKSF
YLVWPRKLQQ PESLGIVQRW FKQQAGNS
|
|---|
| |