Gene PP_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2120 
Symbol 
ID1044973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2418847 
End bp2420514 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content64% 
IMG OID637145533 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionNP_744269 
Protein GI26988844 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.236845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTGT ACAGCGGCCT CAGCCTACTC CCTCTGGTTC CGAGACCCTC GATGTTGCGT 
AAATCCCTCA GAGTGCAAAT TCTCTCGCTG CTCGGCGGCA GTGTGCTGGC GATGCTGCTG
ATCGCCCTGG TGTGTTTCCA GTTCCTGTCG TCCAGCGTGC GTGGCTACGC CGAGCTGGTC
GACGGGCCGC TGCGGGCCTC GCAATTGATT GACGAAGCCA ACCTGCAGTT CAAGATCCAG
GTGCAGGAAT GGAAGAACGT GCTGTTGCGA GGGCGCCAGC CTGCGGAAAT GGACAAGTAC
TGGCAGCAGT TCCAGGCCCG AGAACAGCAA GTTCAACAAC TGCTCGGGCA ATTGATCGAC
AACAGCGATG CCAGGCTCAA GGCGTCGCTG CAGCAATTGC GCGACAGCCA CCGCCAGTTG
GGCCAGGCCT ATGCACAAGG CCGCCAGGCG TTCCTGGCGG CAGGCGGCGA CCCGGTAGCG
GGCGACCGGG CGGTCAAAGG CGTGGACCGT GCCGCCAGTG AGCAAATGAG CGAACTGGTC
GAGCAACTGC GCGCCGATGC TCGCCAGCGT GCAGCCAGCA TCAATGCCAG TGCCGAGCGC
ACGGTATGGT TGGGCCTGCT GGTGATGCTG GCTTCAGCGG TGCTGGTGGG GCTGCTCAGC
CTGTGGCTGG TCAACCGTAG CCTGATCGAG CCGATCCGCC AGTTGATCGA GTACGTCGCG
CAGCTCAGCC AAGGCAGCTT TGCTGCCCGG GTCGACAGCC GTCGGGAGGA TGAGCTGGGG
CGCCTGGCGC GGGCGGCCAA CACCCTGCGT GACTTCCTTG CCGATACCGT CGGCCGGCTG
CAGGACAACG CTCAGGAGCT GGAAGGTGCC AGCGGCCAGT TGCGCAGTAT TGCCGGTGAC
ATGGCCCGCG GTACTCATGA CCAGTTCCAG CGTACCGACC AGGTAGCCAC GGCCATGCAC
GAAATGTCCG CCACTGCCCA AGAGGTCGCT CGCCACGCTG CCGAGGCGGC CCGCGCGGCC
GATGACGCCG ACCACAGCGC CCAGGCCGGC GAGCAGGTGA TGCAGCAGAC CATCGACATC
ATCGGGCTGG TCAACCGCGA AATCGCCGGC ACGGCAACGG TAATTCGCGA TCTGGAGCAT
GACAGCACAC GGATAGGCAA AGTGCTGGAA GTGATCCGCG GCATTGCTGA ACAGACCAAC
CTGCTGGCGC TTAACGCGGC CATCGAAGCG GCCCGTGCTG GCGAAGCCGG GCGTGGTTTT
GCGGTGGTCG CCGATGAAGT GCGTAGCCTG GCCCAGCGCA CGGCAGCGTC GATTGCAGAA
ATTCACCAGA TCATCGAAGC GGTACAGTCA GGGGCTGTGG AGGCGGTCAA GGCCATCGAA
AGTGGCCAGC AACGTAGCCA GGAAGGGGCT GAGCAAGTCG AGCAGGCCGG GCAGATGCTG
CAACGTATCA CGCAGGCGGT GGAAGCGATC CGCGACATGA ACCGGCAGAT CGCCACAGCG
GCCGAGGAGC AGACCAGCGT GGCCGAAGAT ATCTCGCGCA ACCTGATCGA AATTACCCGA
ATTGCCACGG CCAACCAGGA AGCGGTGCAG CATACCGAGC AGGCGGGGCA GCGCCTGCAT
GGTTTGTCAG GGCAGTTGGG CGAAGTCACC TCCCGCCTGA GTGCCTGA
 
Protein sequence
MRLYSGLSLL PLVPRPSMLR KSLRVQILSL LGGSVLAMLL IALVCFQFLS SSVRGYAELV 
DGPLRASQLI DEANLQFKIQ VQEWKNVLLR GRQPAEMDKY WQQFQAREQQ VQQLLGQLID
NSDARLKASL QQLRDSHRQL GQAYAQGRQA FLAAGGDPVA GDRAVKGVDR AASEQMSELV
EQLRADARQR AASINASAER TVWLGLLVML ASAVLVGLLS LWLVNRSLIE PIRQLIEYVA
QLSQGSFAAR VDSRREDELG RLARAANTLR DFLADTVGRL QDNAQELEGA SGQLRSIAGD
MARGTHDQFQ RTDQVATAMH EMSATAQEVA RHAAEAARAA DDADHSAQAG EQVMQQTIDI
IGLVNREIAG TATVIRDLEH DSTRIGKVLE VIRGIAEQTN LLALNAAIEA ARAGEAGRGF
AVVADEVRSL AQRTAASIAE IHQIIEAVQS GAVEAVKAIE SGQQRSQEGA EQVEQAGQML
QRITQAVEAI RDMNRQIATA AEEQTSVAED ISRNLIEITR IATANQEAVQ HTEQAGQRLH
GLSGQLGEVT SRLSA