Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2074 |
Symbol | |
ID | 1042795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2359040 |
End bp | 2359963 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145488 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744224 |
Protein GI | 26988799 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.572241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGCA ACGAACTGCG CAAAGCCGAT ATCAACCTGA TGGTGGTGTT CGAAGCGCTG ATGCAGGAGC GCAACCTCAC CCGTGCCGCG GAGAAGCTGT TCGTCGCCCA GCCCACGGTC AGCGCCGCGC TGGCCAGGTT GCGTGCGATG TTCAACGACC CGCTGCTGGT TCGAGTGGGC AACCGCATGG AGCCCTCGGC CAGGGCCGAA GAGGTGATCA AGTACCTCAC GCCAGCCTTG GATGCGATGT CTGTCGCCCT CAGCATGACC CATGATTTCG ACCCGCTGAC CAGCAGGATG ACCTTCCGCA TCGGCTTGTC CGATGATGTC GAGTCGGGCC TGCTGCCGCC GCTGTTGCGG GCGCTGCGGG TGGAGGCGCC AAACGTGGTG GTGGTCGTGC AGCATGTGGA CTACTGGCGC ATTCCGGACC TGCTGGCGGC GGGCGACGTG ACGGTGGGTA TCAGCCAGAC CAAGGGCCTG CCCGCCAATG CCAAACGCAA GGTGCTACGC ACCCTGCAAG CCAGGGTAGT GCGGGCCGAC AAGTCCAGCA CGCCGCTTTC ACTGGATGAG TTTTGCCAAC GTCCGCATGT CCAGGTTTCG CCAACCGCCA ACACCCAGGG TGTGGTCGAT GACTGGTTGA AAGACATCGG CCGTGAACGC AAGGTGGTGT TGTCGGTGCC GCAGTTCAGT TCGCTGCCGG CGATTCTGGC CGGTACCGAC CTGCTGGCCT GTTGCCCGGA CTATGCCGCA CAGGGTATGG AACGCTGGGG CAACCTGCAG GCCGAGACGC TGCCGTTCGA GACTGCTGCA CTGGAGCTGG CCATGGTCTG GTTGAGCACC ACCGACAGCG ACCCGGCCGA GCGTTGGCTG CGCAGTCGCC TGGAGCACTA CATGGGCGGA CTACGGGAAG CGGTCATGGG ATGA
|
Protein sequence | MNRNELRKAD INLMVVFEAL MQERNLTRAA EKLFVAQPTV SAALARLRAM FNDPLLVRVG NRMEPSARAE EVIKYLTPAL DAMSVALSMT HDFDPLTSRM TFRIGLSDDV ESGLLPPLLR ALRVEAPNVV VVVQHVDYWR IPDLLAAGDV TVGISQTKGL PANAKRKVLR TLQARVVRAD KSSTPLSLDE FCQRPHVQVS PTANTQGVVD DWLKDIGRER KVVLSVPQFS SLPAILAGTD LLACCPDYAA QGMERWGNLQ AETLPFETAA LELAMVWLST TDSDPAERWL RSRLEHYMGG LREAVMG
|
| |