| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2067 |
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| Symbol | |
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| ID | 1042817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2351747 |
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| End bp | 2353330 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637145481 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_744217 |
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| Protein GI | 26988792 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.851411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCA GGTACTGCCC GGCATGTCGG TGGTCAGTAC AGTCGACACA CGCCCCGCAG
AGGTTGCCGA TGCGCACTGA ACAGCCGGTT TCGCTGCGTG CCTGGGTAGC GGTGCTTGGC
GGCCTGTTCG GCTGCTTCAT GGCGGGCATG AACGTGCATG TCACCAGCGC CGCACTACCG
GAAATCCGTG GCTCGCTGGG TGCCAGCTTC GAGGAAGGCT CATGGATCTC CACCGCCTAC
CTGGTGGCGG AAATCGTGAT GATTCCGCTG ACGGCCTGGT TGGTGGACGT GTTCTCGCTG
CGCCGGGTCA TGTGGACCGG CTCGCTCATC TTTCTGATCG CCTCGGTGGC CTGCTCATGG
GCGCCCAACC TGGAGGCGAT GATCGTAATC CGGGTGATCC AGGGGGCTGC GGGCGCGGTG
CTGATTCCCC TGTCGTTCCA GCTGATCATC ACCGAACTGC CGGCCAGCAA GATGGCCATG
GGCATGGCGC TGTTCAGCCT GGCCAACAGC GTGGCGCAGG CCGCCGGGCC GTCGATTGGC
GGCTGGCTGA CCGATGCCTA TTCGTGGCGC TGGATCTTCT ATCTGCAACT CTTCCCCGGC
ATTGCGCTGC TGTTGGCCAT CGCCTGGTCG ATCGAAGCCA AGCCGATGAA GCTCGAACTG
TTACGCAAAG GTGATTGGCT GGGTATCGCG GCCATGGTGA TCGGCCTGGG CGGCTTGCAG
ATCGTGCTGG AAGAAGGCGG CCGGCTGGAC TGGTTCGGCT CGCCGCTCAT TGTCGGCATG
AGCGTGGTCG CTGCCATTGC GTTGGTGGTG TTCGTGGTGA CCCAGCTGTT CGGCCAGCGC
GCGTTCATCA ATCTGCGCTT GCTGGGGCAC TACAACTTCG GCGTTGCCAG CGTGGCGATG
TTCATCTTTG GCGCTGCCAC GTTCGGCCTG GTGTTCCTGG TGCCCAACTA CCTCTCGCAG
TTGCAGGGGT TCAGCGCGCA CGACGTGGGC GTGGCGCTGA TCGCCTATGG CGTGGTGCAG
TTGCTGCTGG CGCCGTTGAT GCCCCGGCTG ATGGGCTGGA CCAGTGCCAA GTTCATGGTC
GCCAGCGGCT TTTTGATCAT GGCGCTGGGC TGCTGGCTGG GGGCTGGCCT GAGCGCCGAC
AGTGCCGACA ACGTGATCAT CCCGTCCACG GTGGTGCGTG GTATTGGCCA GCCTTTCATC
ATGGTTGCGT TATCGGTGCT GGCGGTGGCC GGGCTGGACA AGCGTGAAGC CGGCTCAGCC
TCGGCGGTGT TCTCGATGTT GCGCAACCTG GGTGGCGCCA TCGGTACGGC CGGGTTGACG
CAACTGGTGG CGACCCGTGA ACGCTTTCAC AGTGAGCGCA TTCACGAGCA GGTGACGCTG
TTCGAGCCAA GCGTGCAGGC GCGTATCAAC CAGACGGTGC AAAGCTGGCT GCCGCCTCAG
CAGCAAATGC TGGAAGCGTT GGAGGCGACC ATTCGACGAG AGGCTTACCT GATGGCCTAC
AGTGATGCGT TCTACCTGGC GTGCCTGGCA TTGGTCGGGT GTGCCCTGGC AGCGCTGCTG
CTGCGGGCCA GGCAGCAGCA TTGA
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| Protein sequence | MARRYCPACR WSVQSTHAPQ RLPMRTEQPV SLRAWVAVLG GLFGCFMAGM NVHVTSAALP
EIRGSLGASF EEGSWISTAY LVAEIVMIPL TAWLVDVFSL RRVMWTGSLI FLIASVACSW
APNLEAMIVI RVIQGAAGAV LIPLSFQLII TELPASKMAM GMALFSLANS VAQAAGPSIG
GWLTDAYSWR WIFYLQLFPG IALLLAIAWS IEAKPMKLEL LRKGDWLGIA AMVIGLGGLQ
IVLEEGGRLD WFGSPLIVGM SVVAAIALVV FVVTQLFGQR AFINLRLLGH YNFGVASVAM
FIFGAATFGL VFLVPNYLSQ LQGFSAHDVG VALIAYGVVQ LLLAPLMPRL MGWTSAKFMV
ASGFLIMALG CWLGAGLSAD SADNVIIPST VVRGIGQPFI MVALSVLAVA GLDKREAGSA
SAVFSMLRNL GGAIGTAGLT QLVATRERFH SERIHEQVTL FEPSVQARIN QTVQSWLPPQ
QQMLEALEAT IRREAYLMAY SDAFYLACLA LVGCALAALL LRARQQH
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