Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2066 |
Symbol | |
ID | 1042818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2350928 |
End bp | 2351692 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637145480 |
Product | GntR family transcriptional regulator |
Protein accession | NP_744216 |
Protein GI | 26988791 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.118637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.754365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTGG CGAGCCCGAG CAAAGGTATG AACCCAACGC GCTACTCCAC CGTGGCAAAG GACTTGATGC AAGCGATTGC CAGCGGCCGC TACCCGGTGG GCAGCCTGCT GCCGACCGAG TTCGAGCTGT GCGACCTTTA CAATGTGAGC CGGCACACGG TGCGTGCCGC TATCGACCAG TTGCTCACTC AAGGGCTGGT GTCGCGGCGC AAGCGCGTGG GCACCCGGGT GGAGGCCAGC AGCCCGCGCG GCGGCTATTC GCAGTCGTTG GCCAGCGTGG CTGAGCTGGC GCACCTGGCA GACACCCAGC AGCGGGAAAT CCAGGGCGTG CGCCACTTTG TCGCCGACCT GAGCGAGGCG GCGAGGCTGG GGCTGGTGCC AGGGGAGCAT TACTTCTGCG TGTCGAGCAT CCGCGTCGAC CGGCAGCACG ATGGCGCGCC GCTGTGCTGG ACCGACGTGT ATGCACAGCG CGACTACACC GCGGTCATCG AGCTGGCCCG CGAGCACCCT GACCAGCTGA TTGCCGGCTT GATCGAACAG CACTATGGCC GGGCAATCGC AGTGGTCGAC CAGCAGGTGC GCGCGGTGTT GTTGACAGCG GAAATGGCCC GGGCGCTGAA GGCCGAGGCG GGCTCGCCGG GACTGAAGAT CATCCGCCAC TACCGCGAGG AAAATGGTGA TTTGATGGCG GTTTCCGAGA CCGTGCACCC GGATGACCGC TTTACCTTGG TCACCCAGAT GCGCCGCGAC CGCTCCCCCG CCTGA
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Protein sequence | MKLASPSKGM NPTRYSTVAK DLMQAIASGR YPVGSLLPTE FELCDLYNVS RHTVRAAIDQ LLTQGLVSRR KRVGTRVEAS SPRGGYSQSL ASVAELAHLA DTQQREIQGV RHFVADLSEA ARLGLVPGEH YFCVSSIRVD RQHDGAPLCW TDVYAQRDYT AVIELAREHP DQLIAGLIEQ HYGRAIAVVD QQVRAVLLTA EMARALKAEA GSPGLKIIRH YREENGDLMA VSETVHPDDR FTLVTQMRRD RSPA
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