Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2041 |
Symbol | |
ID | 1042873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2320293 |
End bp | 2321237 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145455 |
Product | LysR family transcriptional regulator |
Protein accession | NP_744191 |
Protein GI | 26988766 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.881958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGA AACAGCTGCG TTATTTGATC GCCATTGTCG AAGCCGGCAG TTTTTCCAAT GCCGCACGCC AGGCGTTCAT CGCCCAACCG GCCTTGAGCC GACAGATAGG CCTGCTGGAG AGCGAACTGG AAATGCAACT GCTGGCGCGC CAGCATGACG GTATCGAACT GACCGATGCC GGGCGGCAGT TGTACGAAGT GGCCCGATCG GTCGTGCAGC AGCTCGATTC GGTGAAAGAC GAGCTGAAAT CCAGCCGCGG CAACCCCAAG GGGCACGTGG CCATCTCGAT TCCCGCCACT GCCTCGGCAC TGTTGTTGCC GGCCATCATT ACCCAGGCCC AGGCACGCTT CCCGGGGATC AAGCTCACCG TTTGGGATGG CCTGAGCCGC GAAGGTGGCC AGGCGATCGA GCTGGGCAAG GTGGATTTCG GCGTGGTGCC CAACGCCGAA GAACTTGTCC ATGTGGTCGC CGAGCCCGTG TTTTCCGAAG ACCTGTATTG GGTCGGCCTG CCTGGGCACG GCCCTGACGA GTCGCCCATC ACCTTGGCTG AAGCCGCAGC GAGCCGCCTG GTAATGCCAC CCCGTAGCCT GCACTTGCGC AGGCGCATCG AGCAGGCTGC CATGGAAACC GGTGTGACAC TGGACTCCAG CTACGAACAG CAGTCGGCCC CCGGTATCAC CAGCCTGGTC CGTGCTGGCC TGGCGGCCAC CATCAGCAAC TGGCCGCCGC TGCTGGATCT GGCCGCGCCT GCCAGCGCGC GGCTGATAGT GGAACCGCGC ATCACCCGCA CCATCGCCTT GGCCCACTCG CAGCACAAGC CGCTGTCGTT CGCCGCCGCC TGCATGCGCG ACCTGGTGCG CGCACTGCTG GTGGATGCGG TGCGCAGCGA GCGCTGGAAA GGAACCTTGA TCGAGCGCGA GGCCCTGGCG GAGCAGAGCC TCTGA
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Protein sequence | MTLKQLRYLI AIVEAGSFSN AARQAFIAQP ALSRQIGLLE SELEMQLLAR QHDGIELTDA GRQLYEVARS VVQQLDSVKD ELKSSRGNPK GHVAISIPAT ASALLLPAII TQAQARFPGI KLTVWDGLSR EGGQAIELGK VDFGVVPNAE ELVHVVAEPV FSEDLYWVGL PGHGPDESPI TLAEAAASRL VMPPRSLHLR RRIEQAAMET GVTLDSSYEQ QSAPGITSLV RAGLAATISN WPPLLDLAAP ASARLIVEPR ITRTIALAHS QHKPLSFAAA CMRDLVRALL VDAVRSERWK GTLIEREALA EQSL
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