Gene PP_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2018 
Symbol 
ID1042916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2290647 
End bp2291606 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID637145432 
ProductBNR domain-containing protein 
Protein accessionNP_744168 
Protein GI26988743 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.108216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGCCG ACAGCGCCCA GGCCGCAGCA GCCGACCAAT ACTCCACCGA ATCGGCCAAG 
GCCAGCCAAA GCCTGTTGAT CGACGCCACC CATGCCGGCA AGCGCCTGGT GGTGGTGGGT
GATCGCGGCC ACATTCTGTT CTCCGACGAC CAGGGCAGTA CCTGGACCCA GGCTCGGGTA
CCCACCCGGC AATTGCTCAC TGCCGTGTTT TTCCTCGACG ACAAGCGTGG CTGGGCCGTC
GGCCATGACG CGCAGATCCT CGCCAGCACC GACGGCGGCG CCACCTGGAG CAAGCAGTTC
GAAGACCTCG CCCGTGAAGC ACCCTTGCTC GATGTCACCT TCCTCGACGC CCAGCACGGC
TTTGCCGTGG GGGCCTATGG TGCCTTGCTG GAAACCACCG ATGGTGGGCA GCACTGGCAG
GATGTGGCCG AGCGGCTGGA CAACCCGGAC CAGCTGCACC TGAACGGTAT CGCCCAAGTG
CGCGATGCCG GCCTGTTCAT CGTGGGTGAG CAGGGCGGCA TGTTCCGCTC CACCGACAAC
GGCCAGACCT GGGCCAAGGT CCAGGGCCCC TACGAGGGCT CGCTGTTCGG CGTGATCGGC
ACCGCCAGGC CGCAGACCCT GCTGGCCTAC GGCCTTCGCG GCAACCTGTT CCGCTCCAGC
GACTTCGGTG ACAACTGGCA GCCGATCGAA CTCAAGGCCG CACGCGGTAC CCTGGAGTTC
GGCCTGGCAG GCGCTACGCT TGTCGATGAT GGCACCCTGG TGCTGGTCGG CAATGGTGGC
AGCGTGCTGC GCAGCACGGA CGACGGCCAG ACCTTCAGCG TGTACAACCG CGCCGACCGC
CTGGCCCTGG CCGGCGTCAG TGGCCTGGCC AACGGCGGCC TGCTGCTGGT GGGGCAGGGT
GGTGTGCACC TGGCCAGCGC CGAAGGGGCT GATCAGCCTG CCCCGGAGGT GCGCCCATGA
 
Protein sequence
MWADSAQAAA ADQYSTESAK ASQSLLIDAT HAGKRLVVVG DRGHILFSDD QGSTWTQARV 
PTRQLLTAVF FLDDKRGWAV GHDAQILAST DGGATWSKQF EDLAREAPLL DVTFLDAQHG
FAVGAYGALL ETTDGGQHWQ DVAERLDNPD QLHLNGIAQV RDAGLFIVGE QGGMFRSTDN
GQTWAKVQGP YEGSLFGVIG TARPQTLLAY GLRGNLFRSS DFGDNWQPIE LKAARGTLEF
GLAGATLVDD GTLVLVGNGG SVLRSTDDGQ TFSVYNRADR LALAGVSGLA NGGLLLVGQG
GVHLASAEGA DQPAPEVRP