Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1941 |
Symbol | |
ID | 1043119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2196384 |
End bp | 2196986 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637145346 |
Product | hypothetical protein |
Protein accession | NP_744093 |
Protein GI | 26988668 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000561308 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGTCGAAAA AAGAGCAAAG AAAACCTGCC ACACTTCGTG CAGAGCAGCA GCAGGAAACG CGGGAAAAAC TGCTTCGGGC TACTATTGAA ACGATTAGCT ACAAAGGCTA CCAAAGCGCA ACGATAGACA ACATCACCTC TCATGCAGGA ACAGGCCGAG CTACATTTTA TCTACATTTC CGGAGTAAGC CCGAGGCATT GATGGCGGGA TGGCAGGAGA TATACATGCC ACAAATGGTT AACATCCTTC AAAATCTTGA CGAATCATAC CCTGCTAAAG GCCAAAAATT AGAAGTGTGG ATCTCCTCAC TCGTGAAGTT CTGGGAAGAC AGTAAGCCCA TTGCGCTAGC TTCGAATGAG GCAATTGCAT TGGAGCCGCA ACTTTCTAGA GAGTGGTTCA GGCAAATATG GACAGTATCT TCACAGCTCC CTAACTGGTC AGCACGAAAC GCGGAGGATC GAGCAGATGC CGAGCTTCGG CTGTTCATGC TTGGTACGTT TACCGAGCAT GTCCTAATGA TGTGGCTAGG CGGATCGGCC CCTATTACTC GCGAGCAGGT TTTGAAATCG TTGGCTGAGC AGTGGTCAAG AGAGTTTTCT TAG
|
Protein sequence | MSKKEQRKPA TLRAEQQQET REKLLRATIE TISYKGYQSA TIDNITSHAG TGRATFYLHF RSKPEALMAG WQEIYMPQMV NILQNLDESY PAKGQKLEVW ISSLVKFWED SKPIALASNE AIALEPQLSR EWFRQIWTVS SQLPNWSARN AEDRADAELR LFMLGTFTEH VLMMWLGGSA PITREQVLKS LAEQWSREFS
|
| |