| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1887 |
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| Symbol | |
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| ID | 1043203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2124627 |
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| End bp | 2128499 |
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| Gene Length | 3873 bp |
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| Protein Length | 1290 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637145295 |
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| Product | hypothetical protein |
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| Protein accession | NP_744042 |
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| Protein GI | 26988617 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0257374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGAGCA CATCCACTTC AGTGCATTCC AATGCCTTTA ATTTTTCTTC CTATATAGAA
AGCGGCGTTG ATCCTCGCAC CGGGCAATAC ACCGTGTCGA TCAGGCTGCC CGAACTGCAA
GGCAATGATT TGCAAGGCCC AGGTTTCGAG CTGGCCTTGT TCTACAGCCC GTTGAATGGC
GAGGACTCTG GATTCGGCAA GGGCTGGAAC CTGCAACTGA CACAAGTACG CAAGCACATC
GTGACGCTGA GCAGTGGTGA AACGTACAAG ATTACCGGTA AGTCTTCGGT TACCGGGCGG
CTGGAAATGA AAGAACAGAA GCTGCGGCAG TTCGATCTGT ATGAGGATCC CCCTGGGCCC
GGTGGGGCCG CACGTTTTCG CGTGGAGCAC CGCTCAGGGT TGGTCGAGGT GCTGGAAGTG
ATGGGCTCGG GAGAGGGCGA GGTCGCCTTG CCCGTGGAGC TGCATTCACC GCTGGGGCAC
AGGTTGCACC TGAGTTACCT GCCCTTCGGC CAGGGTCACA TGCGTTTGAG CGAGGTCCAG
GATGAAAGTG ACGTGCTGCT GAGGCTGCAA CGCAGCGACA ATAGCCGTGT CGAACTGCTT
TGCTACCCTT CCGGTGGTGA TGATGGTGGC CCGCTGGCCC GGTATGCGAT GACGTTGAGT
GAAAGCGACA ACCGGGTCAG TGAGATCATC CTGCCCACGG CCAACCAGGC CCGTTGGCGC
TTCACTTATG AGGACGTGTT GGGGTACTTG TGCGTACGTG AATGCACAAC ACCCTATGGT
GGGGTGGAGC GCGTGTTCTA CCAGGACGCC GGGCATAAGT TCCCAAGCAG CGCAGCACGT
GACAAAAATC TGCCCAGGGT TACCCGCCAT GAAATCGATC CACGCTTTGG TCAGGCGGCG
AAAGTGGTGC GGTATGAATA CCCCGGCACG CACAACTTCA TCGGCGGTGG CAGCAGCATC
TCGTGGTCTG ACGATGGCCT GGACAATCTC TATAAGGTGC CGGAGGACTA TACCTACAAG
TCGATTCAGA TACAGGAAGT GCGGAGGCAG TCGGTGCGTA CGATCACGCG TACATTCAAC
CGCTTCCATT TGCTTACCGA GCAGGCCACC GCTCAGGGTG ACAAGCTGTT GCAAGCCTTC
ACCCGTTACG CTGACAACGC TGGCAACTTC GAGAGCCAGG AGCCTTATTT CCAGCTGCCC
CATGACGAAA CCCAGCGTTG GTCGCTGATC AGCAACCCCT CCCGGCAGCG AGAAGAAAAG
CGAGTCACCC GCTATGACAG CCACGGCAAC GTGTTGACTC GCCTGTTGCC GAATCAGGTA
CTGGAAACCA ATGTCTGGTA CTCGGCCGAG GAGGAGGGTG ATGAGCACGG TTTCGTGCGC
AACCTGAAGA CCCGGACCGT GCAACCCGCA GCGACAGGAC ACGGGGCGGC CGCCACCTTG
ACCCAGGCGT TCCAGTACCG GGCGCTGACC CCGTTGGGTA GCTACCTGAA GCAGCCCTGG
CGCTTGCTGG AAAGCGAGAC CCTGAGCGAA TCAGGTAGCG CGCCTGGTAC GTTCCTGGAA
AAAATCAGCA AGCTTTACCA GGAGGAATCG GCCGAGCGCT TCAGCTATGG GCGAGTCAGG
CAGCAAACTG TCAGTTACCC CGGTGTCGAT GGAGGCAGCC CGTTCGACAC CCTGACCCAT
TATGGCTACT CCCTGCCGGA CGATGAGCGT GCACTGCAGA CGGTGGAAAA GCTGGTGGGT
GTTGACGGTG AGTCCAAGAC CATCACCTTG CGACATGCCC TGGACACGGG CGAGCCGCTG
CTCAACCTGG ACGACAACGG TGTCGAAATC CGCTACTACT ACGACGCCTT GCGTCGGGTA
ACACGCGAGG TCGTGGCGCC AGGCAAGCCT TTCGAAGCGG AACGCAATTA CAAGTACTTC
CTCTGCGCAT ACGACAACGA GCAGGCCCAG CAATGGGCCT ATGACGTGAA GCAAGTCGAG
ACGCACACAC TGCTCGACGG GCTCAGCCGA CCCATCTTCG AAGAACGCGC AGACAAGGAC
AGCGCGACGT ATGCTGGTGC TTTGCGGCCT ATCTATCGCG CACGTTACGA CGAACTGGAC
CAGCTGGTCG AGGAAACCGA AATCGACTGG CTGGGTGATG GTTTGCTGGA ATTGACGAGC
CACATCAGTT ACGACGACTG GGGCCAGAGG TACGCTGTCC TGAATCCGGA TGGCACGACT
CAAGTCGAGG AAATCGACCA GGTGGCGAGC ACGGACGGTC CGGTGCATCG CGCCTGGCGT
GAGGTGGAGC ACTCACGGGT CAGCGGCATC ACCGAGACGT GGTACAACCT GTTCGAGAAG
CCGGTGCGGA TCGAGCGATT TGCCCTGGAT GGAAGCACCA GTATCAGCTT GCAGGTCAAT
GACTACGATG GGCTTGGCCG GCTGAGTAGG GAAGCTCAAG GAAGCGGTGC AGGCCAGCGT
GTGGTTGAGT ATCGTTACGA TGCTTTCGAC CGTGTCCGTG AGGAACGGCT GGCCGATCGA
GTCAATACGG TCTATCGCAC CTATGCCGGG CACAGTCGCA ATGACCTGCC GGTCAGCATC
AAGGTGGGGA ACACCGAAAG TGCCGCCGTG TTGTTGGGCG AACAGGTGTT CGATGGCCTT
GAGCGGCGAA CCGTAGCCAT TACCGGAGGG CGAGAGCAGA CATTCGAATA TGACCCAGGT
GAGCGGCAAC CGCATTGGGT GAAGGCGCCG GATGGTACCC GGATCGAGTA CCAGTACCGG
CCAGCGTTGG GTGAAGAGCC CGTCCTTCGG GTCCTCTCCG GCAAGGAAGC GAAATACGAG
TATGACCTGA AAAATGCCAG GCTTACCCAT TGCGAAGAGC CTGGGGATGA CGAGAATTCC
GGTTACACAT TGGACCGTAG CCATTTCCTG AGCAACGGCG AGGTCAAGCG CGAGTCGCGA
ACGGTGGATG GTGAAGCGTT CAGCATGACT TACGACTACA GTTTTCGCAG TCGCTTGCGT
GCCTATGTGG ATGTGCTGGG GCAGACACAG CTCTACGATT TCGACGATGT CGGGCGCCTG
GAAAAAACCA CGCTGCACGC GCCTGAGCCC AAAAGGACTC GCTACCGGCT GCAGCGTGCG
CCTGCCAGGC AACTGCTGCT GCTGGAGTCG ACGTTCGGGT ATGACCGCCA AGGACGCATG
GCGTCCATTA CCACCACCGA TGCCAGCACC GGGCATGCTT TGGCAACTCT GCTCGAGTAC
GATGAATTCG ACAGGGAGAT CCTGCGGACC TTCGATTTTG GTGACACCGT GCAAACGTTG
GCACAGGACT ATGATGAGTT CGATTGTTTG AAGTCCCGCA TTCTGAAAGA GCGCCCGAAG
GGCAGCGACG AAAGCCAGGC CACGCTGTTG CGGCATGAGA CTTACCAGTA CGATCGGCGC
GGGCGGCTGC AGATATACAC CTGTGATGGC CCTGAAGCGC CCGTGGACCC CTCCGGTCAA
ACCATTGCCA GGCAGATATT CGGCTTCGAT GGCCTGGACA ACATCCTCTC GGTGATCACC
TACAGACCGG ACGGGTCGTG GCAGCGGACC TTGTACGAAT TCAAGAATAG CGATCCGGCA
CAAATGAGCC GGATCATTCC GCCTGATGCG CTACTGGAGA CCTATGACGT CGATCACGAC
CTGGAGGAGT TGTTCAAGAT CGTCAAATAC GATCCGCAGT TGGCTATCGA TTTGCATTAC
GACGGCAATG GCAACCTGAT CAGTGATGAG CAGGGGCGGG TACTGACGTA TGACGGGCTC
AACCGTTTGC TCAGGGTCGA GACCCCTGAC GGTGAACGCT GTCGCTACAA CTATGACCCA
GAGAACATTC TGTCCGGCAC GGCCCCTGGC TAA
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| Protein sequence | MMSTSTSVHS NAFNFSSYIE SGVDPRTGQY TVSIRLPELQ GNDLQGPGFE LALFYSPLNG
EDSGFGKGWN LQLTQVRKHI VTLSSGETYK ITGKSSVTGR LEMKEQKLRQ FDLYEDPPGP
GGAARFRVEH RSGLVEVLEV MGSGEGEVAL PVELHSPLGH RLHLSYLPFG QGHMRLSEVQ
DESDVLLRLQ RSDNSRVELL CYPSGGDDGG PLARYAMTLS ESDNRVSEII LPTANQARWR
FTYEDVLGYL CVRECTTPYG GVERVFYQDA GHKFPSSAAR DKNLPRVTRH EIDPRFGQAA
KVVRYEYPGT HNFIGGGSSI SWSDDGLDNL YKVPEDYTYK SIQIQEVRRQ SVRTITRTFN
RFHLLTEQAT AQGDKLLQAF TRYADNAGNF ESQEPYFQLP HDETQRWSLI SNPSRQREEK
RVTRYDSHGN VLTRLLPNQV LETNVWYSAE EEGDEHGFVR NLKTRTVQPA ATGHGAAATL
TQAFQYRALT PLGSYLKQPW RLLESETLSE SGSAPGTFLE KISKLYQEES AERFSYGRVR
QQTVSYPGVD GGSPFDTLTH YGYSLPDDER ALQTVEKLVG VDGESKTITL RHALDTGEPL
LNLDDNGVEI RYYYDALRRV TREVVAPGKP FEAERNYKYF LCAYDNEQAQ QWAYDVKQVE
THTLLDGLSR PIFEERADKD SATYAGALRP IYRARYDELD QLVEETEIDW LGDGLLELTS
HISYDDWGQR YAVLNPDGTT QVEEIDQVAS TDGPVHRAWR EVEHSRVSGI TETWYNLFEK
PVRIERFALD GSTSISLQVN DYDGLGRLSR EAQGSGAGQR VVEYRYDAFD RVREERLADR
VNTVYRTYAG HSRNDLPVSI KVGNTESAAV LLGEQVFDGL ERRTVAITGG REQTFEYDPG
ERQPHWVKAP DGTRIEYQYR PALGEEPVLR VLSGKEAKYE YDLKNARLTH CEEPGDDENS
GYTLDRSHFL SNGEVKRESR TVDGEAFSMT YDYSFRSRLR AYVDVLGQTQ LYDFDDVGRL
EKTTLHAPEP KRTRYRLQRA PARQLLLLES TFGYDRQGRM ASITTTDAST GHALATLLEY
DEFDREILRT FDFGDTVQTL AQDYDEFDCL KSRILKERPK GSDESQATLL RHETYQYDRR
GRLQIYTCDG PEAPVDPSGQ TIARQIFGFD GLDNILSVIT YRPDGSWQRT LYEFKNSDPA
QMSRIIPPDA LLETYDVDHD LEELFKIVKY DPQLAIDLHY DGNGNLISDE QGRVLTYDGL
NRLLRVETPD GERCRYNYDP ENILSGTAPG
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