Gene PP_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1838 
Symbol 
ID1043263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2061083 
End bp2063140 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content62% 
IMG OID637145240 
Producthypothetical protein 
Protein accessionNP_743993 
Protein GI26988568 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.8565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCT CCGACGCCTT GAAGCAACAG GGCGCGCGAA CGTCATTTTC GCCGACCCTG 
AAATCCCACC TGGCCTACAC GCTGCTCAGC GGCCTGGTGA TCATGCTGAT GCTCAGCCTG
GTGCGCCTGG CGCTGCTGGC TTACAACAAC GACATGGTCG GCGATACCCC TTATTCGACG
GTCGCCGAAG GCTTCCTCAA CGGCTTGCGC TTCGACCTGC GGGTGGTGGT GTACATCAGC
ATCCCCCTGC TGCTGGCCAT GCTCAGCCCC TGGGCCATGG CCCGGCGTGG CGTGTTCCGT
TTCTGGCTGA CCCTCGCTTC GAGCGTGGTG ATGTTCCTCG GCCTGATGGA AATGGACTTC
TACCGCGAGT TCCACCAGCG CCTCAACGGC CTGGTGTTCC AGTACATCAA GGAAGACCCG
AAAACCGTCA TGAGCATGCT CTGGTACGGT TTCCCGGTGG TTCGCTACCT GCTGGCCTGG
GCCTTCGGTA CCTGGCTGCT GAGCCTGCTG TTCAAAGGTA TCGATCGCGT CACCCGTGCC
GAAGGCCTGT ACCGCGTTGC CCCGTGGTAC AAGCGCCTGG CGGTATTCAT GGTGATCCTG
CTGGTGGCCG TGGTCGCTGC CCGTGGCACC CTGCGCCAGG GCCCGCCGAT GCGCTGGGGT
GATGCCTTTA CCACGGACTC CAACTTCGTC AACCAGCTGG GCCTGAACGG CACCCTGACC
CTGATCGACG CCGCCAAGAG CCGCTTTGGC GAGGACCGTG CCAACATCTG GAAGCCAGTC
CTGCAGCAGG ACGTGGCCAC GCAAAGTGTG CGTGAGCAAC TGCTGACCGC CCACGACACC
CTGGTCGACG CCGACGAAGC CGCTATCCGC CGCGACTTTG TGCCGCCGGC TGACCGTACC
CTGCCGATCA AGAACGTGGT GGTGATCCTG ATGGAAAGCT TCGCCGGCCA TTCGGTTGGC
GCGCTTGGCA GCCCCAACAA CATCACCCCG TACTTTGACA AGCTGGCCAA AGAAGGCCTG
CTGTTCGACC GCTTCTTCTC CAACGGCACC CATACCCACC AGGGCATGTT CGCCACCATG
GCCTGCTTCC CCAACCTGCC AGGTTTCGAA TACCTGATGC AGACCCCGGA AGGCGGCCAT
AAGCTGTCGG GCCTGCCGGC CCTGCTCAGC GCCCGTGACT ACGACGATGT GTACGTCTAC
AACGGCGACT TTGCCTGGGA CAACCAGTCC GGGTTCTTCG GCAACCAGGG GATGACCACC
TTCATCGGCC GTAATGACTT CGTCAACCCG GTGTTCTCCG ACCCGACCTG GGGTGTGTCC
GACCAGGACA TGTTCGACCG CGGCAACGAA GAGCTGGCCA AGCATGATGG CAAGAAGCCG
ATCTACGCGC TGCTGCAGAC GCTGTCCAAC CACACGCCGT ATGCCCTGCC GAAGGACCTG
CCGGTAGAGA AGGTTACCGG CCAGGGCCGT CTGGACGAGC ACCTGACCGC CATGCGTTAT
TCGGACTGGG CGCTGGGCCA GTTCTTCGAG AAGGCGCGTA AGGAGCCTTA CTTCAAGGAC
ACCCTGTTCG TCATCGTCGG TGACCATGGC TTTGGCAACC ACCAGCAGGT TACCGAGCTG
GACCTGGGCC GCTTCAACGT GCCGCTGCTG CTGATTGCCC CGGGCATTCA GGAGAAGTTC
GGTGCGGTGA ATCACACCGT GGGTACCCAG GTCGACATCG TGCCGACCAT CATGGGCCGC
CTGGGTGGCA AGGCTCGCCA CCAGTGCTGG GGGCGCGACC TGCTCAACCT GCCCGAGGGT
GACCAGGGCG TAGGCATGAT CAAGCCGTCG GGCAGCGAGC AGATTGTCGG GCTGGTGCAG
GGTGACCGTA TCCTGATCGA GTCCAAGGAC ATGAGCCCGC GGATGTACCG CTACCAGTTG
GGCAGCGAGT TCAAGGCCGA ACTGATCGAA AGCCCGGACC AGCCGGAAAT GCTCAAGAAG
CTGGAAGCGT ATATCCAGAC CGCGACCAAG AGCCTGCTGG ATAACACCGC CGGCGTGGTG
CACGGCACAC CGAAGTAA
 
Protein sequence
MATSDALKQQ GARTSFSPTL KSHLAYTLLS GLVIMLMLSL VRLALLAYNN DMVGDTPYST 
VAEGFLNGLR FDLRVVVYIS IPLLLAMLSP WAMARRGVFR FWLTLASSVV MFLGLMEMDF
YREFHQRLNG LVFQYIKEDP KTVMSMLWYG FPVVRYLLAW AFGTWLLSLL FKGIDRVTRA
EGLYRVAPWY KRLAVFMVIL LVAVVAARGT LRQGPPMRWG DAFTTDSNFV NQLGLNGTLT
LIDAAKSRFG EDRANIWKPV LQQDVATQSV REQLLTAHDT LVDADEAAIR RDFVPPADRT
LPIKNVVVIL MESFAGHSVG ALGSPNNITP YFDKLAKEGL LFDRFFSNGT HTHQGMFATM
ACFPNLPGFE YLMQTPEGGH KLSGLPALLS ARDYDDVYVY NGDFAWDNQS GFFGNQGMTT
FIGRNDFVNP VFSDPTWGVS DQDMFDRGNE ELAKHDGKKP IYALLQTLSN HTPYALPKDL
PVEKVTGQGR LDEHLTAMRY SDWALGQFFE KARKEPYFKD TLFVIVGDHG FGNHQQVTEL
DLGRFNVPLL LIAPGIQEKF GAVNHTVGTQ VDIVPTIMGR LGGKARHQCW GRDLLNLPEG
DQGVGMIKPS GSEQIVGLVQ GDRILIESKD MSPRMYRYQL GSEFKAELIE SPDQPEMLKK
LEAYIQTATK SLLDNTAGVV HGTPK