Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1838 |
Symbol | |
ID | 1043263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 2061083 |
End bp | 2063140 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637145240 |
Product | hypothetical protein |
Protein accession | NP_743993 |
Protein GI | 26988568 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.8565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCT CCGACGCCTT GAAGCAACAG GGCGCGCGAA CGTCATTTTC GCCGACCCTG AAATCCCACC TGGCCTACAC GCTGCTCAGC GGCCTGGTGA TCATGCTGAT GCTCAGCCTG GTGCGCCTGG CGCTGCTGGC TTACAACAAC GACATGGTCG GCGATACCCC TTATTCGACG GTCGCCGAAG GCTTCCTCAA CGGCTTGCGC TTCGACCTGC GGGTGGTGGT GTACATCAGC ATCCCCCTGC TGCTGGCCAT GCTCAGCCCC TGGGCCATGG CCCGGCGTGG CGTGTTCCGT TTCTGGCTGA CCCTCGCTTC GAGCGTGGTG ATGTTCCTCG GCCTGATGGA AATGGACTTC TACCGCGAGT TCCACCAGCG CCTCAACGGC CTGGTGTTCC AGTACATCAA GGAAGACCCG AAAACCGTCA TGAGCATGCT CTGGTACGGT TTCCCGGTGG TTCGCTACCT GCTGGCCTGG GCCTTCGGTA CCTGGCTGCT GAGCCTGCTG TTCAAAGGTA TCGATCGCGT CACCCGTGCC GAAGGCCTGT ACCGCGTTGC CCCGTGGTAC AAGCGCCTGG CGGTATTCAT GGTGATCCTG CTGGTGGCCG TGGTCGCTGC CCGTGGCACC CTGCGCCAGG GCCCGCCGAT GCGCTGGGGT GATGCCTTTA CCACGGACTC CAACTTCGTC AACCAGCTGG GCCTGAACGG CACCCTGACC CTGATCGACG CCGCCAAGAG CCGCTTTGGC GAGGACCGTG CCAACATCTG GAAGCCAGTC CTGCAGCAGG ACGTGGCCAC GCAAAGTGTG CGTGAGCAAC TGCTGACCGC CCACGACACC CTGGTCGACG CCGACGAAGC CGCTATCCGC CGCGACTTTG TGCCGCCGGC TGACCGTACC CTGCCGATCA AGAACGTGGT GGTGATCCTG ATGGAAAGCT TCGCCGGCCA TTCGGTTGGC GCGCTTGGCA GCCCCAACAA CATCACCCCG TACTTTGACA AGCTGGCCAA AGAAGGCCTG CTGTTCGACC GCTTCTTCTC CAACGGCACC CATACCCACC AGGGCATGTT CGCCACCATG GCCTGCTTCC CCAACCTGCC AGGTTTCGAA TACCTGATGC AGACCCCGGA AGGCGGCCAT AAGCTGTCGG GCCTGCCGGC CCTGCTCAGC GCCCGTGACT ACGACGATGT GTACGTCTAC AACGGCGACT TTGCCTGGGA CAACCAGTCC GGGTTCTTCG GCAACCAGGG GATGACCACC TTCATCGGCC GTAATGACTT CGTCAACCCG GTGTTCTCCG ACCCGACCTG GGGTGTGTCC GACCAGGACA TGTTCGACCG CGGCAACGAA GAGCTGGCCA AGCATGATGG CAAGAAGCCG ATCTACGCGC TGCTGCAGAC GCTGTCCAAC CACACGCCGT ATGCCCTGCC GAAGGACCTG CCGGTAGAGA AGGTTACCGG CCAGGGCCGT CTGGACGAGC ACCTGACCGC CATGCGTTAT TCGGACTGGG CGCTGGGCCA GTTCTTCGAG AAGGCGCGTA AGGAGCCTTA CTTCAAGGAC ACCCTGTTCG TCATCGTCGG TGACCATGGC TTTGGCAACC ACCAGCAGGT TACCGAGCTG GACCTGGGCC GCTTCAACGT GCCGCTGCTG CTGATTGCCC CGGGCATTCA GGAGAAGTTC GGTGCGGTGA ATCACACCGT GGGTACCCAG GTCGACATCG TGCCGACCAT CATGGGCCGC CTGGGTGGCA AGGCTCGCCA CCAGTGCTGG GGGCGCGACC TGCTCAACCT GCCCGAGGGT GACCAGGGCG TAGGCATGAT CAAGCCGTCG GGCAGCGAGC AGATTGTCGG GCTGGTGCAG GGTGACCGTA TCCTGATCGA GTCCAAGGAC ATGAGCCCGC GGATGTACCG CTACCAGTTG GGCAGCGAGT TCAAGGCCGA ACTGATCGAA AGCCCGGACC AGCCGGAAAT GCTCAAGAAG CTGGAAGCGT ATATCCAGAC CGCGACCAAG AGCCTGCTGG ATAACACCGC CGGCGTGGTG CACGGCACAC CGAAGTAA
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Protein sequence | MATSDALKQQ GARTSFSPTL KSHLAYTLLS GLVIMLMLSL VRLALLAYNN DMVGDTPYST VAEGFLNGLR FDLRVVVYIS IPLLLAMLSP WAMARRGVFR FWLTLASSVV MFLGLMEMDF YREFHQRLNG LVFQYIKEDP KTVMSMLWYG FPVVRYLLAW AFGTWLLSLL FKGIDRVTRA EGLYRVAPWY KRLAVFMVIL LVAVVAARGT LRQGPPMRWG DAFTTDSNFV NQLGLNGTLT LIDAAKSRFG EDRANIWKPV LQQDVATQSV REQLLTAHDT LVDADEAAIR RDFVPPADRT LPIKNVVVIL MESFAGHSVG ALGSPNNITP YFDKLAKEGL LFDRFFSNGT HTHQGMFATM ACFPNLPGFE YLMQTPEGGH KLSGLPALLS ARDYDDVYVY NGDFAWDNQS GFFGNQGMTT FIGRNDFVNP VFSDPTWGVS DQDMFDRGNE ELAKHDGKKP IYALLQTLSN HTPYALPKDL PVEKVTGQGR LDEHLTAMRY SDWALGQFFE KARKEPYFKD TLFVIVGDHG FGNHQQVTEL DLGRFNVPLL LIAPGIQEKF GAVNHTVGTQ VDIVPTIMGR LGGKARHQCW GRDLLNLPEG DQGVGMIKPS GSEQIVGLVQ GDRILIESKD MSPRMYRYQL GSEFKAELIE SPDQPEMLKK LEAYIQTATK SLLDNTAGVV HGTPK
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