| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1816 |
|---|
| Symbol | |
|---|
| ID | 1043285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 2041551 |
|---|
| End bp | 2042552 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637145218 |
|---|
| Product | alcohol dehydrogenase, zinc-containing |
|---|
| Protein accession | NP_743971 |
|---|
| Protein GI | 26988546 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.110809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CCAACCGCCG CTTCCTGCTT GCCAAACGCC CGGTCGGCGC CGTGCGCCGT
GACGACTTCA GCTTCGAGAC CGTACCCGCC GAACAACCCG GCGAAGGCCA GGTACTGGTG
CGCAACCTGT ACCTGTCGCT GGACCCGGCC ATGCGCGGCT GGATGAACGA AGGCAAGTCC
TACATCCCGC CCGTGGCCCT GGGCCAGGTA ATGCGTGCGC TGGGTGTAGG TGAAGTGGTT
GCCTCCAATC ACCCCGGCTA CCAGCCCGGC GACCATGTGA GCGGCGCCCT CGGTGTGCAG
GACTACTTCA CCGGCGAGCC CCAGGGCCTG CACAAGATCG ACCCCAAGCT GGCCCCCCTG
CCCCGTTACC TGTCAGCCTT GGGCATGACC GGCATGACCG CCTACTTCGC CCTGCTGGAG
GTTGGCCAAC CCAAAGCTGG CGACACCGTG GTCATTTCCG GCGCGGCCGG TGCGGTGGGC
AGCATTGTCG GGCAGATTGC CAAGATCAAA GGCTGCCGCG TGGTCGGCAT TGCCGGCGGT
GCCGAGAAGT GCCAGTACCT GAAGGACGAG CTGGGCTTTG ACGGCGTGAT CGACTACAAG
GCCGAAGACG TGCTGGCCGG CCTGAAGCGC GAATGCCCCA AAGGCGTGGA CGTGTACTTC
GACAACGTGG GCGGCGATAT CCTCGATGCC GTGCTGACGC GCATCAACTT CAAGGCACGC
ATTGTGATTT GCGGCGCGAT CAGCCAGTAC AACAACAAAG AAGCGGTGAA AGGCCCGGCC
AACTACCTGT CGCTGCTGGT GAACCGCGCG CGCATGGAAG GTTTTGTGGT GATGGATTAC
ACCAAGGACT ACGGCAAGGC CGCGCAGGAA ATTGCCGGCT GGTTGGCCAA TGGTCAGGTG
AAGAGCAAAG AGGATGTGGT GGAAGGGCTG GAAACCTTCC CGGAGACCTT GTTGAAGCTG
TTCAGCGGGG AGAATTTTGG CAAGTTGGTG TTGAAGGTTT AA
|
|---|
| Protein sequence | MTQTNRRFLL AKRPVGAVRR DDFSFETVPA EQPGEGQVLV RNLYLSLDPA MRGWMNEGKS
YIPPVALGQV MRALGVGEVV ASNHPGYQPG DHVSGALGVQ DYFTGEPQGL HKIDPKLAPL
PRYLSALGMT GMTAYFALLE VGQPKAGDTV VISGAAGAVG SIVGQIAKIK GCRVVGIAGG
AEKCQYLKDE LGFDGVIDYK AEDVLAGLKR ECPKGVDVYF DNVGGDILDA VLTRINFKAR
IVICGAISQY NNKEAVKGPA NYLSLLVNRA RMEGFVVMDY TKDYGKAAQE IAGWLANGQV
KSKEDVVEGL ETFPETLLKL FSGENFGKLV LKV
|
|---|
| |