| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1800 |
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| Symbol | rmd |
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| ID | 1043303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 2022966 |
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| End bp | 2023862 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637145202 |
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| Product | oxidoreductase Rmd |
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| Protein accession | NP_743955 |
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| Protein GI | 26988530 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0661573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGG CTAGCAAGCG CGCGCTGATT ACAGGTGTTC ACGGGTTCAC CGGCCGCTAC
ATGGCAGCCG AGTTGCGGGC CGGCGGCTAT GAAGTCTTCG GTACAGGCAG CCAGCCGTTG
CCGGCTGCGG ACTACCGCCA GGTCGATCTG ACCGATGGGC AGGGCCTGCG CGCGTTGCTC
GCCGAACTGC AGCCGGATGT AGTTGTGCAT CTGGCTGCCA TCGCTTTTGT CGGGCATGGT
ACCGCCGACG CGTTCTACAA GGTCAACCTG ATAGGCACGC GCAACCTGCT CGAAGCCATC
GCGGCCTGTG GCAAAACGCC TGAGTGCGTG TTGATCGCCA GCAGTGCCAA CGTCTATGGC
AACGTTTCCG AAGGGATGCT GGGCGAGCAG ACCCCGCCAG CGCCGGCCAA TGATTACGCG
GTCAGCAAGT TGGCCATGGA ATACATGGCG CGGCTGTGGT GTGACCGTTT GCCTATCGTC
ATCACGCGTC CTTTCAATTA CACCGGTGTT GGGCAGGCAG AGAATTTCCT GCTGCCCAAG
ATTGTTTCGC ATTTTCGCCG CAAGGCCGAC ACCATCGAGC TCGGCAACCT AGACGTATGG
CGCGATTTCA GCGATGTACG TGCGGTCGTG CAGGCGTACC GCGGCTTGAT CGAGGCACGC
CCGCTGGGCC AGATAGTCAA CGTCAGTTCG GGGCAAACGC ATTCGCTGCG CGAGGTTATC
GCCAAGTGTT CCGCCATTAC CGGCCATCAG CTGGACGTGC AGGTCAACCC GGCCTTTGTC
CGTGCCAACG AGGTCAAGAC CTTGTGTGGC GATAATGGCA AGCTGCGCGG GTTTGTGCCG
GGGTGGCATA CGCCTTCGCT GGACGAAACC TTGGGTTGGA TGCTTTCTGA TCAATGA
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| Protein sequence | MQKASKRALI TGVHGFTGRY MAAELRAGGY EVFGTGSQPL PAADYRQVDL TDGQGLRALL
AELQPDVVVH LAAIAFVGHG TADAFYKVNL IGTRNLLEAI AACGKTPECV LIASSANVYG
NVSEGMLGEQ TPPAPANDYA VSKLAMEYMA RLWCDRLPIV ITRPFNYTGV GQAENFLLPK
IVSHFRRKAD TIELGNLDVW RDFSDVRAVV QAYRGLIEAR PLGQIVNVSS GQTHSLREVI
AKCSAITGHQ LDVQVNPAFV RANEVKTLCG DNGKLRGFVP GWHTPSLDET LGWMLSDQ
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