Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1565 |
Symbol | |
ID | 1045358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1758834 |
End bp | 1760129 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144965 |
Product | HK97 family phage portal protein |
Protein accession | NP_743722 |
Protein GI | 26988297 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000649364 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAGTCGG CCGAGCCGGG AGTGGCTTCG AGCCTGGCTG GCTGGGCCGG CCGCAAGATT CGCCTCACCG ACTCCGCGTT CTGGAACACG TACTACGGCA CCGATTCGGC GTCGGGGAAG GTGGTCAGTC AGCAGACGGC GCTGCAGCTC TCGACGGTGT GGGCTTGCGT GCGCTTGATC GCCGAGACCA TCGCAACGCT GCCGATCGCT CTGTATGAGG ACAAGAACGG CGCGCCGGTG GTGGCCAGTT CTCACCCGGT CAACTTCGTC ATCAGCCAGC AGCCGAACGC CGATCAAACC CCGGTGGAGT TCTGGGAGAA CGTCATGGCT AGCCTGCTGC TCCAGGGGAA CGCCTTCTGC GAGCCTCACC AGAGCGGCCG GACGCTGACC AGCCTGGAAT TTCTACTGCC GCAGAACATG TCGCCGCCGC GGCGCCTGGC GGACGGCTCC ATCGAGTACC GCTACACCGA CAACTTCGGC AAGCCTCACA CGCTGACCGA GGATCAGATG GTGCACGTGC GAGCCTTCGG CATGGACCCG CTTTGCGGCC TGTCGCCGCT GGCCTACGGG CGGCAGGTGC TGGGCTCAGC CATGGCTGCT GATGAGTCGG CGGCCAAGAT GTTTGCCAAC GGCATGAAGC TGGGCGGCGT CCTGTCCACC GACCAGATCC TCAAGCCGGA CCAGCGGAAG GACATCCGCG AGGACATGAT CAAGCAGTTC TCCGGCGCCA CGAACCACGG CAAGACCATG GTCCTCGAGG CTGGCATGAA GTACCAACAG GTCTCCATGA CGCCGGAAGA TGCCCAGATG CTGCAGACCA GGGCGTTCAA CGTCGAGGAG ATTTGCCGCT GGTTCCGGGT GCCGCCGTGG ATGGTCGGGC ATACGCAAAA CTCCACCAGC TGGGGCACTG GCATGGAGCA GCAGATGATC GGCTTCCTGT CGTTCACCCT GCTTCCCTGG ATCAAGCGCA TTGAAATGTG CGCCAACCGG CGCCTGCTGC GACCAGATGA GCGCCGCCGC TTCTACGTGA AGTTCAACCC GGAAGGGTTG CTGCGCATGG ATAGCGCGGC GCGTGCGGCC TTCTACAGCT CCATGACCCA GAACGGTATC TACACCCGGG ACGAGTGCCG GCTGAAAGAG AACATGCCCC CGGAGGGAGG CAACGCGGCG AAGCTCACCG TGCAATCCAA CATGCTGCCG ATCGACAAGC TGGGCGAAGA CCCCGGTGGC GCAAACCAGG CCAAGGCGGC GCTGCTCGAC TGGCTCAGCG ACCAGCCAAG AGGTAACACC CCATGA
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Protein sequence | MKSAEPGVAS SLAGWAGRKI RLTDSAFWNT YYGTDSASGK VVSQQTALQL STVWACVRLI AETIATLPIA LYEDKNGAPV VASSHPVNFV ISQQPNADQT PVEFWENVMA SLLLQGNAFC EPHQSGRTLT SLEFLLPQNM SPPRRLADGS IEYRYTDNFG KPHTLTEDQM VHVRAFGMDP LCGLSPLAYG RQVLGSAMAA DESAAKMFAN GMKLGGVLST DQILKPDQRK DIREDMIKQF SGATNHGKTM VLEAGMKYQQ VSMTPEDAQM LQTRAFNVEE ICRWFRVPPW MVGHTQNSTS WGTGMEQQMI GFLSFTLLPW IKRIEMCANR RLLRPDERRR FYVKFNPEGL LRMDSAARAA FYSSMTQNGI YTRDECRLKE NMPPEGGNAA KLTVQSNMLP IDKLGEDPGG ANQAKAALLD WLSDQPRGNT P
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