| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1420 |
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| Symbol | tctD |
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| ID | 1045866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1620431 |
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| End bp | 1621102 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637144821 |
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| Product | winged helix family two component transcriptional regulator |
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| Protein accession | NP_743578 |
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| Protein GI | 26988153 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.448392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTGC TACTGGTCGA AGACCACCTG CAACTGGCCG AAAGCGTGGC CCTGGCCTTG
AAAAGCCATG GCCTGACCGT AGATGTGCTG CATGACGGCG TGGCTGCCGA CTTGGCGCTG
GCCAGTGAGG AATACGCCGT GGCCGTGCTG GATGTCGGCC TGCCGCGCAT GGACGGCTTT
GAGGTACTGG CGCGCTTGCG AGGCCGTGGC AAAACCTTGC CAGTGCTTAT GCTGACTGCG
CGCAGCGACG TCAAGGACCG GGTCCATGGC CTGAACCTGG GCGCCGACGA TTATCTGGCC
AAGCCGTTTG AGCTGACCGA GCTGGAAGCG CGGGTCAAGG CCTTGCTACG CCGCAGTGTG
CTCGGTGGCG AGCGACAGCA ACGCTGTGGG CCGCTGGTGT ATGACCTGGA CACCCGGCGC
TTCACCCTCG GTGATGACAA CCTGACGCTG ACCTCCCGCG AGCAGAGTGT GCTGGAAGCG
CTGATCGCTC GCCCGGGCCG GGTGATGAGC AAGGAGCAGC TGGCTGCCCA GGTGTTTGGC
CTGGACGAAG AAGCCAGCCC TGACGCCATC GAAATCTACA TTCACCGGCT GCGCAAAAAG
CTCGACGGGC ACCCTGTGGC CATCGTCACT TTCCGCGGTC TGGGCTATTT GCTTGAGCAC
CGCGATGCGT GA
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| Protein sequence | MRVLLVEDHL QLAESVALAL KSHGLTVDVL HDGVAADLAL ASEEYAVAVL DVGLPRMDGF
EVLARLRGRG KTLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELTELEA RVKALLRRSV
LGGERQQRCG PLVYDLDTRR FTLGDDNLTL TSREQSVLEA LIARPGRVMS KEQLAAQVFG
LDEEASPDAI EIYIHRLRKK LDGHPVAIVT FRGLGYLLEH RDA
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