| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1308 |
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| Symbol | mdeA |
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| ID | 1041604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1495570 |
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| End bp | 1496766 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637144710 |
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| Product | methionine gamma-lyase |
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| Protein accession | NP_743468 |
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| Protein GI | 26988043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACT CCCACCACAA CACCGGTTTT TCCACGCGGG CCATTCATCA TGGCTATGAC
CCGCTTTCCC ATGGTGGCGC CCTGGTGCCA CCGGTGTACC AGACGGCTAC CTATGCCTTC
CCCACTGTCG AGTACGGTGC TGCCTGCTTC GCCGGGGAGG AGCCTGGGCA TTTCTACAGC
CGCATTTCCA ACCCCACGCT GGCCTTGCTG GAGCAGCGCA TGGCTTCGCT GGAGGGCGGT
GAAGCGGGGT TGGCGTTGGC ATCGGGGATG GGCGCAATTA CCTCAACCCT CTGGACCCTG
CTCAGGCCTG GGGATGAGCT GATTGTCGGG CGCACCCTGT ATGGCTGTAC CTTCGCTTTT
CTGCACCACG GTATTGGTGA GTTCGGGGTG AAAGTTCGCC ATGTCGATCT CAACGATGCC
AAGGCCCTGA AAGCGGCGAT CAGCAGCAAA ACACGGATGA TCTACTTCGA AACACCGGCC
AACCCCAACA TGCAACTTGT GGATATCGCG GCGGTTGTGG AGGCCGTGCG GGGGCATGAT
GTGCATGTGG TGGTCGATAA CACCTACTGT ACGCCGTACC TGCAGCGGCC ACTGGAGCTG
GGGGCGGACC TGGTGGTGCA CTCGGCAACC AAGTACCTCA GTGGGCATGG TGATATCACT
GCCGGGTTGG TGGTGGGGCG CAAGGTGTTG GTCGATCGCA TTCGCCTGGA AGGGCTGAAG
GATATGACCG GGGCAGTGCT GTCGCCCCAT GACGCGGCGC TGCTGATGCG CGGGATCAAG
ACGCTTGCCT TGCGCATGGA CCGGCATTGT GCCAATGCCC AGCAGGTGGC GGAGTTTCTC
GTCCGGCAGC CGCAGGTGGA ATTGATTCAT TACCCGGGGC TACCGTCTTT TGCCCAGTAC
GCGTTGGCCC AGCGACAGAT GCGTTTGCCT GGCGGGATGA TTGCCTTTGA GCTCAAGGGT
GGCATTGAGG CGGGGCGGCG CTTCATGAAT GCACTGCAGC TCTTTGCCCG GGCGGTGAGC
CTGGGGGATG CAGAATCGCT GGCGCAGCAT CCGGCGAGCA TGACGCATTC CAGCTATACG
CCGCAGGAGC GGGCGCATCA CGGGATATCG GAGGGGTTGG TGCGTCTGTC GGTGGGGCTG
GAGGATGTGG AGGACCTGCT GGCAGATGTC GAACAGGCAT TGCAGGCCTG CTGTTAG
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| Protein sequence | MRDSHHNTGF STRAIHHGYD PLSHGGALVP PVYQTATYAF PTVEYGAACF AGEEPGHFYS
RISNPTLALL EQRMASLEGG EAGLALASGM GAITSTLWTL LRPGDELIVG RTLYGCTFAF
LHHGIGEFGV KVRHVDLNDA KALKAAISSK TRMIYFETPA NPNMQLVDIA AVVEAVRGHD
VHVVVDNTYC TPYLQRPLEL GADLVVHSAT KYLSGHGDIT AGLVVGRKVL VDRIRLEGLK
DMTGAVLSPH DAALLMRGIK TLALRMDRHC ANAQQVAEFL VRQPQVELIH YPGLPSFAQY
ALAQRQMRLP GGMIAFELKG GIEAGRRFMN ALQLFARAVS LGDAESLAQH PASMTHSSYT
PQERAHHGIS EGLVRLSVGL EDVEDLLADV EQALQACC
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