Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1155 |
Symbol | |
ID | 1045469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1322780 |
End bp | 1323853 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637144550 |
Product | diguanylate cyclase |
Protein accession | NP_743316 |
Protein GI | 26987891 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.149088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.131446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAACC GCAACGGCAA AGGACTTTCA TTCGTCAAGC GCATCTACCT GCCGCGGGTC ATTGGCCTGG GAATCGGCCT GTTCACTGTC ATGGCGGCCA TTGCGCCGCT GTCACCCCCC TCCTGGGCAT GGCTGCTGGT ACTGTTCAAT GGTTTGCTGT GGCCGCACGT GGCCTACCTG TGGGCTGCCC GCTCGACAAC GCCTTACCAG GCGGAACAGC GCAACCTCCT GCTGGACTCC CTGATGGGCG GGTTCTGGAC CGCCGCCATG CACTTCAACC CGTTGCCCAG CGTGACCGTG CTGGCGATGA TGACGATGAA CAACGTCGCC GCCGGCGGCA AGCGCATGGT CTTTCGCGGG GTGCTGGCGC AACTGGCTGG CATACTCGCC GCCATCCTGC TGCTCGGCCC TGGCTTGCAA TTGACCGCCA CGCCCCTGCA GGTCTATGCG TGCCTGCCAA TGCTGGGGCT GTACCCGCTG GCCTTGGGCT GGGTGTGCTA CCAGCTTGCG ATCAAGCTGG GCGACCACAA GCGCCGGCTG AGCGCCCTGA GCCTGACCGA CAGCCTGACC GGGCTGTTCA ACCACGGTGC CTGGAAGGAC CTGCTGCAGC TCAAGTTCCA GGCGTGCAAG CAACAACAGG GGCACGCGGT GATTGCCCTG ATCGACATCG ATCACTTCAA GACCATCAAC GACACCTTTG GCCATGTGGT CGGCGACTGT GTACTGCGCC AGCTCAGTGC TGAGCTGCGG CGCAGTTTGC GCGAGGGCGA CCAGGCCGGG CGTTACGGCG GCGACGAGTT CTGCGTGATC CTGCCCGAAA CCAGCGAAGC CCAGGCCTGC CAAGCCATGG AGCGTCTACG CGAGCGGGTT TCCAGCTACC GCAACCCACA GTTACCGCAC CTGCGCATCA GCCTGAGTAT CGGCCTGTCG CCCTTCCAGG CCAGCCTCGA GTCCCCCGAG CACTGGCTCG AACAGGCAGA CAAGGCGCTG TACATCGCCA AGCACGCTGG CCGCGATCAG GTCAATTTTG CCCGCGGTGA AGCTGCCACG CTCAGGCTGG CCTATCCTGA TTGA
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Protein sequence | MDNRNGKGLS FVKRIYLPRV IGLGIGLFTV MAAIAPLSPP SWAWLLVLFN GLLWPHVAYL WAARSTTPYQ AEQRNLLLDS LMGGFWTAAM HFNPLPSVTV LAMMTMNNVA AGGKRMVFRG VLAQLAGILA AILLLGPGLQ LTATPLQVYA CLPMLGLYPL ALGWVCYQLA IKLGDHKRRL SALSLTDSLT GLFNHGAWKD LLQLKFQACK QQQGHAVIAL IDIDHFKTIN DTFGHVVGDC VLRQLSAELR RSLREGDQAG RYGGDEFCVI LPETSEAQAC QAMERLRERV SSYRNPQLPH LRISLSIGLS PFQASLESPE HWLEQADKAL YIAKHAGRDQ VNFARGEAAT LRLAYPD
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