Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1106 |
Symbol | |
ID | 1045251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 1264401 |
End bp | 1265417 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144501 |
Product | RNA processing exonuclease |
Protein accession | NP_743267 |
Protein GI | 26987842 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.599734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCG TCATCGCCCG CCCCGAAGGC CTGTACTGCC CGCCCGGAGA TTTCTACATC GACCCCTGGC GGCCCGTGGA GCGGGCTGTC ATTACCCATG GCCACGGCGA CCACGCACGC ACCGGCAATG GCCATTATCT GACCGCCAGC CCCGGTGCCG GCATTCTGCG CAGCCGCCTG GGCCAGGACA TCAATCTGCA GACCCTGCCC TACGGTGAGC GCCTGCTGCA CCACGGCGTG ACGTTGAGCC TGCACCCGGC CGGGCACGTG CTGGGTTCGG CACAGGTGCG CCTGGAGTAT CGAGGTGAAG TCTGGGTTGC ATCCGGTGAC TACAAGGTAG AACCCGATGG CACCTGTACG CCCTTCGAAC CGGTGGCGTG CCACACCTTC ATCACCGAGT CGACCTTCGG CCTGCCGATC TACCGCTGGC CAAGCCAGAG CGAGATCTTC GCCAGCATCA ATGCCTGGTG GCGGGCCAAC AGTGAACAGG GCAAGGCCAG CGTGCTGTTC TGCTATGCCT TCGGAAAGGC CCAGCGGATT CTGCATGGGC TGGATGCCAG CATCGGCCCG ATCCTCGTGC ATGGCGCCAT GGAGCCGCTC AACCGGGTGT ACCGGGATGC CGGCATCCGC CTGCCGGAAA CCCGCTACGC AGGCGATATT CCGCGCAACG ATCCACTGCT GCGCCAGGCA CTGGTCCTGG CGCCCCCGTC AGCCGGTGGC AGTAGCTGGA TGCGCCGTTT TGGCGATTAC AGTGATGCCT TCGCCAGCGG CTGGATGCTG CTACGCGGCG CCCGCCGGCG GCGCGGCGTG GACCGGGGCT TTGTGCTGTC CGACCACGCC GACTGGCCTG GCCTGCTCTG GGCCATTGGC CAGACCGGTG CCCAACGGGT GATGGTCACT CACGGCTCGG TCGAGGTACT GGTGCGCTAC CTCACCGAAC AAGGCCTGGA TGCCCGCGCC TTCGTCACCG AGTATGGCGA CGAAGACGAT GTGCCCAACA CCGCCCCCTC GCCATGA
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Protein sequence | MDLVIARPEG LYCPPGDFYI DPWRPVERAV ITHGHGDHAR TGNGHYLTAS PGAGILRSRL GQDINLQTLP YGERLLHHGV TLSLHPAGHV LGSAQVRLEY RGEVWVASGD YKVEPDGTCT PFEPVACHTF ITESTFGLPI YRWPSQSEIF ASINAWWRAN SEQGKASVLF CYAFGKAQRI LHGLDASIGP ILVHGAMEPL NRVYRDAGIR LPETRYAGDI PRNDPLLRQA LVLAPPSAGG SSWMRRFGDY SDAFASGWML LRGARRRRGV DRGFVLSDHA DWPGLLWAIG QTGAQRVMVT HGSVEVLVRY LTEQGLDARA FVTEYGDEDD VPNTAPSP
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