| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1052 |
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| Symbol | xcpW |
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| ID | 1044623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 1201595 |
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| End bp | 1202185 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637144447 |
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| Product | type II secretion pathway protein XcpW |
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| Protein accession | NP_743213 |
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| Protein GI | 26987788 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.192612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC GCCAAACCGG CCTGACCCTG ATCGAACTGA TGGTCGCCCT GGCCCTGACT
GCCGTTCTTG GCATCATGCT CGCCGCGCTG GTCAATGGCT GGCTGAAGGT GCGCGAACGC
CTGCAGGACA CCACTCGGCA AATCTCGGTG CTGGACTTTT GCCTGGCCCT GGAGCGGCGC
TTCGACAGCC CGGTGCTGCG CCGTGTCTAC GACCAGCGTC TGCCGCTGGC CAGCCGTTGG
CTGGACTGGC AGCCCGCCAG CAACCAGTTG CTGTGGGTCG CCAGCACCGG CCTGCCGGCA
GCCGAAGGTG GCTCGCGCCT GCAACGCCAG CGCCTGCGGT TCGAGGCCCG CGAGCAACGC
CTGCTGCTGG AAAGCTCGGC GGACCTGTAC GCCGCTGGCG CCCCGCGCTG GGTACAGCGC
GAACGACTCG ACCAGGTCAG CGCCATGAAC GTTCTGTTCT ACCAGGGCGG CCGCTGGCTG
GCCTGGCCTT CTGACCAACC GGTGCACCCA GGTCGTGGTG TGCGTCTGGA ACTGCTGCGT
GATGGAGCCC CCTATGTCTG CACCTTCGCC CTTCCATGGG GGCGCTCATG A
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| Protein sequence | MKHRQTGLTL IELMVALALT AVLGIMLAAL VNGWLKVRER LQDTTRQISV LDFCLALERR
FDSPVLRRVY DQRLPLASRW LDWQPASNQL LWVASTGLPA AEGGSRLQRQ RLRFEAREQR
LLLESSADLY AAGAPRWVQR ERLDQVSAMN VLFYQGGRWL AWPSDQPVHP GRGVRLELLR
DGAPYVCTFA LPWGRS
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