5 homologs were found in PanDaTox collection
for query gene PP_1052 on replicon NC_002947
Organism: Pseudomonas putida KT2440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002947  PP_1052  type II secretion pathway protein XcpW  100 
 
 		 196 aa  389  1e-107  Pseudomonas putida KT2440  Bacteria  normal  0.192612  normal  1 
 
 
-
 
NC_009512  Pput_1093  hypothetical protein  97.45 
 
 		 196 aa  379  1e-104  Pseudomonas putida F1  Bacteria  normal  0.377212  normal  0.221471 
 
 
-
 
NC_010322  PputGB1_1049  type II secretion system protein J  91.33 
 
 		 196 aa  356  9.999999999999999e-98  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_4174  type II secretion system protein J  81.12 
 
 		 196 aa  325  2.0000000000000001e-88  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_3370  N-terminal methylation  28.42 
 
 		 211 aa  48.1  0.00008  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.306452 
 
 
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