Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_1020 |
Symbol | |
ID | 1044015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 1163692 |
End bp | 1164546 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637144415 |
Product | aldose 1-epimerase |
Protein accession | NP_743181 |
Protein GI | 26987756 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC ATCCGCTCCA TCGCTTCTTC TCCTCGCAGC GGCCCCGGCC GACATTCGAG TGGGAGCGTT ATCAGCAGCG CGATGTCCTG ATCATCGACC ACCCCCGTTG CCAGGCGGTG TTCAGCCGCC AGGGCGCGCA GTTGCTGCAC TTTCAACCAG CGGGTGAACG GCCGTGGCTG TGGTGCGCCG AACAGTGGCC GCAGGTGGGG GCGATCCGCG GTGGTGTGCC GGTGTGCTGG CCCTGGTATG GCCGTCATCC CAGCGAAGAC CTGTGGCCGG CCCACGGTTG GGCGCGGTTG CTGGACTGGA AGCTGGTGGA CAGCCGTGAG GACGAGGAGG GCGTGACCCT GAAATGGCGG CTGGACCTGT GCGACTGGCA GGTCGACCTG CATGCCCGGC TGGGTAGCCG CATGGAGCTG AGCCTGAGCA CCGAACATCA GGACAGCGAA CCCTGCCAGT TGAGCCATGC GCTGCTGGCG TACTGGCGCA TCAGTGACGT GTCCGAGATA GCGCTGTCTG GTCTGGAAGA CATCGAGGGC TACGACCGCC TCAACCGTCA GGCTTGCCGT GAAGATGGCG CGCTGAAGCT CAAGGGCGGC TGCCAGAAGG TCTACCCCGG TACGCCACGG GTGCAATTGC AGGACCCGGC CTGGCAGCGC GAGCTGTGCA TCGATACCGG TGACAGCGAC GACACCGTGG TCTGGCACCC TGGCAATCGC CCGCTGATGG GGGTGACCGG CCGCGAGTCG CAGCGTTTTG TCTGCGTCGA GGCGACCAGT GGCAGTGGCG AAGGCCTGAG CCTGGCACCT GGGCAGCGTG CGCACCTGCG TTTGCAGGCG CACCGGCTCA GTTGA
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Protein sequence | MPEHPLHRFF SSQRPRPTFE WERYQQRDVL IIDHPRCQAV FSRQGAQLLH FQPAGERPWL WCAEQWPQVG AIRGGVPVCW PWYGRHPSED LWPAHGWARL LDWKLVDSRE DEEGVTLKWR LDLCDWQVDL HARLGSRMEL SLSTEHQDSE PCQLSHALLA YWRISDVSEI ALSGLEDIEG YDRLNRQACR EDGALKLKGG CQKVYPGTPR VQLQDPAWQR ELCIDTGDSD DTVVWHPGNR PLMGVTGRES QRFVCVEATS GSGEGLSLAP GQRAHLRLQA HRLS
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