Gene PP_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1020 
Symbol 
ID1044015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1163692 
End bp1164546 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content66% 
IMG OID637144415 
Productaldose 1-epimerase 
Protein accessionNP_743181 
Protein GI26987756 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC ATCCGCTCCA TCGCTTCTTC TCCTCGCAGC GGCCCCGGCC GACATTCGAG 
TGGGAGCGTT ATCAGCAGCG CGATGTCCTG ATCATCGACC ACCCCCGTTG CCAGGCGGTG
TTCAGCCGCC AGGGCGCGCA GTTGCTGCAC TTTCAACCAG CGGGTGAACG GCCGTGGCTG
TGGTGCGCCG AACAGTGGCC GCAGGTGGGG GCGATCCGCG GTGGTGTGCC GGTGTGCTGG
CCCTGGTATG GCCGTCATCC CAGCGAAGAC CTGTGGCCGG CCCACGGTTG GGCGCGGTTG
CTGGACTGGA AGCTGGTGGA CAGCCGTGAG GACGAGGAGG GCGTGACCCT GAAATGGCGG
CTGGACCTGT GCGACTGGCA GGTCGACCTG CATGCCCGGC TGGGTAGCCG CATGGAGCTG
AGCCTGAGCA CCGAACATCA GGACAGCGAA CCCTGCCAGT TGAGCCATGC GCTGCTGGCG
TACTGGCGCA TCAGTGACGT GTCCGAGATA GCGCTGTCTG GTCTGGAAGA CATCGAGGGC
TACGACCGCC TCAACCGTCA GGCTTGCCGT GAAGATGGCG CGCTGAAGCT CAAGGGCGGC
TGCCAGAAGG TCTACCCCGG TACGCCACGG GTGCAATTGC AGGACCCGGC CTGGCAGCGC
GAGCTGTGCA TCGATACCGG TGACAGCGAC GACACCGTGG TCTGGCACCC TGGCAATCGC
CCGCTGATGG GGGTGACCGG CCGCGAGTCG CAGCGTTTTG TCTGCGTCGA GGCGACCAGT
GGCAGTGGCG AAGGCCTGAG CCTGGCACCT GGGCAGCGTG CGCACCTGCG TTTGCAGGCG
CACCGGCTCA GTTGA
 
Protein sequence
MPEHPLHRFF SSQRPRPTFE WERYQQRDVL IIDHPRCQAV FSRQGAQLLH FQPAGERPWL 
WCAEQWPQVG AIRGGVPVCW PWYGRHPSED LWPAHGWARL LDWKLVDSRE DEEGVTLKWR
LDLCDWQVDL HARLGSRMEL SLSTEHQDSE PCQLSHALLA YWRISDVSEI ALSGLEDIEG
YDRLNRQACR EDGALKLKGG CQKVYPGTPR VQLQDPAWQR ELCIDTGDSD DTVVWHPGNR
PLMGVTGRES QRFVCVEATS GSGEGLSLAP GQRAHLRLQA HRLS