Gene PP_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0889 
Symbol 
ID1044777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1031905 
End bp1033041 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content67% 
IMG OID637144284 
Productbeta-lactamase 
Protein accessionNP_743050 
Protein GI26987625 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG GCTTGCCCGC GAAGGGCTGC AAAGCAGTCC CAATCAAGGC GAGCTCGATG 
AAGGTACTGT TGGTCATCCT TGCGCTGGTT GCAGGTAGCG CCAAAGCTGA AGACTGGCCT
GACCCGCAGT GGCAGAACGA CCCTGCCACC CTCGACTGGC AGGCCGTCGA TGCCTACGCC
TTTCCTGCAC GCTCCCCCTC GGAGCGCAAC GGCATCCGCA CGGACGCTCT GCTGATCATC
CGCGACGGGC GTATCCTCCA CGAGCGCTAC ACCGCGCCCA CCCGCGCCGC CACCGCGCAC
CTGACCTGGT CGGTAAGCAA GAGCGTACTG GCCACGGTAA TGGGCGTAGC CCAGGGCGAA
GGCCGCTTCC AGCTGCAAGA CCCGGTCAGC CGCTTCTATC CACCCATGCG CGCCCACCCA
GGCGTGCGCG TTGCCGACCT GCTGCACTGG GCCAGTGGCC TTGAGTGGCA GGAAGACTAC
GAATACGCGC CGCTGAAGTC CTCGGTGGTG GCCATGCTGT ATACCCGTGG CCGCGCAGAC
ATGGCCGCCT ACGCGGCGGC CCGGGGTGCC GCCGCCAGCC CCGGTCAGCG GTTCCTCTAC
TCCAGCGGCG ACAGCAACCT GCTGGCCGCC GCGCTGCGTG GCATGCTCGA TGCCGGGCAG
TACCCCGACT ACCCCTGGCA CGCACTGTTC ACCCCGTTGG GTATCGGCAG TGCGGTGTGG
GAGCGTGACC GGGCAGGCAC CTATGTAGGC TCTTCCTATC TCTACCTCAG TGCCCGCGAT
TTGGCCCGTA TTGGCCTGCT GATGCAGCGC GACGGGCGCT GGCAGGGCCG ACAATTGCTG
CCCAAAGCCT GGGTAGCTTT CAACCGCACC CCGTTTGTCC AGGCCCAGGC GCTGCCTGGC
GAGGCCATCC CGGGCGGCCA CTGGTGGCTC AACCAGCCGC TGGCTGGCGC CGAACGGCCT
TGGCCCAGTG CACCGGCAGA CACCTTCGCC GCCCTTGGCC ACTGGGGGCA GGCTTTATAT
GTGCTGCCTG AGCAAAAGCT GGTGATCGTG CGCTACGCCG ATGACCGCGA CAGCAGCTAT
CGACACGACG AATTGCTCAA GCGGGTGCTG GCGGTACTGG CCGGGGAGGG GGCATGA
 
Protein sequence
MSAGLPAKGC KAVPIKASSM KVLLVILALV AGSAKAEDWP DPQWQNDPAT LDWQAVDAYA 
FPARSPSERN GIRTDALLII RDGRILHERY TAPTRAATAH LTWSVSKSVL ATVMGVAQGE
GRFQLQDPVS RFYPPMRAHP GVRVADLLHW ASGLEWQEDY EYAPLKSSVV AMLYTRGRAD
MAAYAAARGA AASPGQRFLY SSGDSNLLAA ALRGMLDAGQ YPDYPWHALF TPLGIGSAVW
ERDRAGTYVG SSYLYLSARD LARIGLLMQR DGRWQGRQLL PKAWVAFNRT PFVQAQALPG
EAIPGGHWWL NQPLAGAERP WPSAPADTFA ALGHWGQALY VLPEQKLVIV RYADDRDSSY
RHDELLKRVL AVLAGEGA