Gene PP_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0552 
Symboladh 
ID1044336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp640761 
End bp641849 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID637143935 
Product2,3-butanediol dehydrogenase 
Protein accessionNP_742715 
Protein GI26987290 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACC TGAGCCACAC CCACATGCGC GCGGCCGTCT GGCATGGCCG CCACGATATT 
CGTGTCGAAC AGGTACCTTT GCCGGCCGAC CCTGCGCCGG GCTGGGTGCA GATCAAGGTG
GACTGGTGCG GCATCTGCGG CTCCGACCTG CACGAATATG TTGCCGGCCC GGTGTTCATC
CCGGTAGAGG CCCCGCACCC GCTGACCGGC ATTCAGGGCC AGTGCATCCT CGGCCACGAA
TTCTGCGGCC ACATCGCCAA GCTTGGCGAA GGCGTGGAAG GCTATGCCGT AGGCGACCCG
GTGGCGGCAG ACGCGTGCCA GCATTGTGGT ACCTGCTATT ACTGCACCCA TGGCCTGTAC
AACATCTGCG AACGCCTGGC GTTCACCGGC CTGATGAACA ACGGTGCCTT CGCCGAGCTG
GTCAACGTGC CCGCCAACCT GCTCTACCGG CTGCCGCAGG GCTTCCCTGC CGAAGCCGGG
GCACTGATCG AGCCGCTGGC GGTGGGTATG CACGCGGTGA AAAAGGCCGG CAGCCTGCTT
GGGCAAACCG TTGTAGTGGT TGGGGCCGGC ACCATCGGCC TGTGCACCAT CATGTGCGCC
AAGGCTGCAG GTGCGGCACA GGTCATCGCC CTTGAGATGT CCTCTGCGCG CAAAGCCAAG
GCCAAGGAAG CGGGCGCCAA CGTGGTGCTG GACCCCAGCC AGTGCGATGC CCTGGCGGAA
ATCCGCGCAC TGACTGCTGG GCTGGGCGCC GATGTGAGTT TTGAGTGCAT CGGCAACAAA
CATACGGCCA AGCTGGCCAT CGACACCATC CGCAAAGCAG GCAAGTGCGT GCTGGTGGGT
ATTTTCGAAG AGCCCAGCGA GTTCAACTTC TTCGAGCTGG TGTCCACCGA GAAGCAAGTG
CTGGGGGCGT TGGCGTACAA CGGCGAGTTT GCTGACGTGA TTGCCTTCAT TGCTGATGGT
CGGCTGGATA TTCGCCCGCT GGTAACCGGC CGGATCGGAT TGGAGCAGAT TGTCGAGCTG
GGCTTCGAGG AACTGGTGAA CAACAAAGAG GAGAACGTGA AGATCATCGT TTCACCAGGT
GTGCGCTGA
 
Protein sequence
MNDLSHTHMR AAVWHGRHDI RVEQVPLPAD PAPGWVQIKV DWCGICGSDL HEYVAGPVFI 
PVEAPHPLTG IQGQCILGHE FCGHIAKLGE GVEGYAVGDP VAADACQHCG TCYYCTHGLY
NICERLAFTG LMNNGAFAEL VNVPANLLYR LPQGFPAEAG ALIEPLAVGM HAVKKAGSLL
GQTVVVVGAG TIGLCTIMCA KAAGAAQVIA LEMSSARKAK AKEAGANVVL DPSQCDALAE
IRALTAGLGA DVSFECIGNK HTAKLAIDTI RKAGKCVLVG IFEEPSEFNF FELVSTEKQV
LGALAYNGEF ADVIAFIADG RLDIRPLVTG RIGLEQIVEL GFEELVNNKE ENVKIIVSPG
VR