| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0220 |
|---|
| Symbol | |
|---|
| ID | 1043764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 272657 |
|---|
| End bp | 273766 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637143598 |
|---|
| Product | ABC transporter ATP-binding protein |
|---|
| Protein accession | NP_742388 |
|---|
| Protein GI | 26986963 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1135] ABC-type metal ion transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.333916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00688358 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGG CCAGCGCGCT CAGGGCGCCT ACACCCCAAG CACTGCCGCC AATGGCCAGG
GAACAGGCCC TGCGCCCCGA CGTCAATGAA GCCCACGTGC GCTTCATCGG CCTGGGCAAG
ACCTACCCCG GCCAGGCGCA ACCGGCGTTG CAAGGCATCG ACCTGAACAT CCGCCATGGC
GAGATCTTCG GCATCATCGG CCGCAGCGGC GCCGGTAAGT CATCACTGCT GCGCACCATC
AACCGCCTGG AGCAACCCAG CCAGGGCCGC GTATTGATCG ACCAGGTGGA TATCGCGCCT
TTCAATGAGG ACCAGCTTGT GGCCCTGCGC CGGCGCATCG GCATGATCTT CCAGCACTTC
AACCTGATGT CGGCCAAGAC CGTGTGGCAG AACGTCGAAT TGCCGTTGAA AGTCGCCGGC
GTGGCAAAAG CCGAACGCCA GCGCAAGGTG CGCGAGTTGC TGGAACTGGT CGGCCTGCAG
GAAAAACATC ACGTGTACCC GGCGCAACTG TCCGGCGGGC AGAAACAGCG CGTGGGCATT
GCCCGGGCAC TGGTGCACAC CCCCGAGATC CTGCTGTGCG ACGAGGCCAC CTCGGCGCTG
GACCCGGAAA CCACCGCCTC GATCCTGGAA CTGCTGCGCG ATATCAACCA GCGCCTGGGG
CTGACCATCG TGCTGATCAC CCACGAAATG GCGGTGATTC GCGACATCTG CCACCGGGTA
GTGGTGCTGG AACGCGGCGC AGTGGTTGAG CAGGGCGAGG TCTGGCGGGT GTTTGGTTCA
CCTCGTCACG AGGTTACCCG CACCCTGCTC GCCCCTTTGC AGGCCAAGCT ACCCGCCGCA
CTGCAAGCCA GCCTCCAGGC CCACCCGGCG AGCGGCAACA GCGCCGTAGT GCTGAAACTG
ACGGTGCTCG GCGAGCCAGA GCTGTCTGCC CTGTTCAACG ACCTGGGCGG GCGTGTGCGT
CTGCTGCAGG GCGGCGTGGA AACCATCGGC GAACATGCCT TGGGGCAACT CATCCTCTCG
GTGCAACACT CGCCGCACGA CACCCATCAA TTGCTGGAAC GTGCCCGCCG TTGGGCCGAG
GACGTGGAGG TATTGGGCCA TGTGGATTGA
|
|---|
| Protein sequence | MSQASALRAP TPQALPPMAR EQALRPDVNE AHVRFIGLGK TYPGQAQPAL QGIDLNIRHG
EIFGIIGRSG AGKSSLLRTI NRLEQPSQGR VLIDQVDIAP FNEDQLVALR RRIGMIFQHF
NLMSAKTVWQ NVELPLKVAG VAKAERQRKV RELLELVGLQ EKHHVYPAQL SGGQKQRVGI
ARALVHTPEI LLCDEATSAL DPETTASILE LLRDINQRLG LTIVLITHEM AVIRDICHRV
VVLERGAVVE QGEVWRVFGS PRHEVTRTLL APLQAKLPAA LQASLQAHPA SGNSAVVLKL
TVLGEPELSA LFNDLGGRVR LLQGGVETIG EHALGQLILS VQHSPHDTHQ LLERARRWAE
DVEVLGHVD
|
|---|
| |