| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0178 |
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| Symbol | |
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| ID | 1043704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 229467 |
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| End bp | 230342 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637143556 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | NP_742347 |
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| Protein GI | 26986922 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.590801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CTTTGCTGAC CTTGGGCCGT GTGGTCCTGA CCTTGCTGGT AGTGACCTTC
GCCGCCGTGC TCGTGTGGCA GATGGTGGTC TACTACATGT TTGCCCCCTG GACCCGAGAC
GGCCATATCC GCGCTGACGT GATCCAGATC GCCCCCGATG TGTCGGGATT GATCCAGAAG
GTCGAGGTGC GCGACAACCA GACCGTCAAA CGTGGCGACG TGCTGTTCAC CATCGACCAG
GACCGCTTCA CCCTGGCCCT GCGTCAAGCC AAGGCAACCC TTGGCGAGCG CCAGGAGACC
CTGGCCCAGG CTTCCCGCGA AGCGCAGCGC AACCGCAAGC TGGGCAACCT GGTGGCCGCC
GAGCAACTGG AAGAAAGCCA GTCCCGCGAG GCCCGTGCCC GTTCGGCTGT CAGCGAGGCG
CAAGTGGCTG TCGATACTGC CCAGCTCAAC CTTGACCGCT CGGTGGTGCG CAGCCCGGTA
GACGGCTACC TCAACGACCG CGCGCCGCGT AACCACGAGT TCGTCACTGC TGGCCGCCCG
GTGCTTTCGG TGGTCGACAG TGCCTCCTAC CACGTCGACG GCTACTTCGA GGAAACCAAG
CTGGGGGGTA TCCATATTGG TGACGCCGTG GATATCCGCG TGATGGGCGA CAACACCCGC
CTGCGTGGCC ATGTGCAGAG CTTCGCCGCT GGCATCGAAG ACCGCGACCG CAGCAGTGGC
GCCAACCTGC TGCCCAACGT CAACCCGGCG TTCAGCTGGG TACGCCTGGC CCAGCGCATT
CCGGTGCGCA TCGCCTTTGA CGAAGTGCCG CAAGACTTCC GCATGATCGC CGGGCGTACT
GCGACGGTGT CGATCATCGA GGGCCAGCGC CCATGA
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| Protein sequence | MKKPLLTLGR VVLTLLVVTF AAVLVWQMVV YYMFAPWTRD GHIRADVIQI APDVSGLIQK
VEVRDNQTVK RGDVLFTIDQ DRFTLALRQA KATLGERQET LAQASREAQR NRKLGNLVAA
EQLEESQSRE ARARSAVSEA QVAVDTAQLN LDRSVVRSPV DGYLNDRAPR NHEFVTAGRP
VLSVVDSASY HVDGYFEETK LGGIHIGDAV DIRVMGDNTR LRGHVQSFAA GIEDRDRSSG
ANLLPNVNPA FSWVRLAQRI PVRIAFDEVP QDFRMIAGRT ATVSIIEGQR P
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