Gene PP_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0080 
Symbol 
ID1043561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp90446 
End bp91063 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content65% 
IMG OID637143452 
Producthypothetical protein 
Protein accessionNP_742250 
Protein GI26986825 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000365782 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAAACG CCGAAACCCC AGTGTTCAAA CTGGTCCTGT TCGGGCCTGA AAGCAGCCTG 
GGCAATGCCC TGATGGTCGA GCTGCTGTCG CGCCAGCACG AAGTCATCGC CGTGGTCGAC
GACCTCAACC GCCATTCGCC GCGCCCGGGC CTGCACTTCA AGATAGGGGG GCTGGGTGAT
GCCCACCAGG CGGAGCAGGG CGCAGCGGGC GGCTCGGCGG TGATCGCCCT GTTACCAGCG
CTGGCGCCGG GTGACCTGCC GGGGCAGGCA CGCTTGAGCG AGGCGCTGGT GGCGGGGCTT
GCGCGTACGA CTATACGCCG GCTGCTGCTT GTGGGCGATT TCGATGTGCT GGATGAACCG
GGCAAGTACA GCGAGGTGGA GCGGGAATGC GTGGCCCAGG TGGTTGATGG GTTGCAGCGC
AGTGCCTTGC ACTGGACGCT GATCAATGCA CCGCAGGAAC TGGCCGGGTT AGGCATGGAG
CATTTTCGCA GTACCGAAGG CACGCTGGAG CCTGGGCTGG CTGAGCCGTT GCGGCGCTTG
TCCAGGATCG CAGCGGGGAT GGTGGACATG CTGGAGCTGG ACTTGCACCG GAGCGAGCAC
CTGAACTTCG TGGTCTAG
 
Protein sequence
MKNAETPVFK LVLFGPESSL GNALMVELLS RQHEVIAVVD DLNRHSPRPG LHFKIGGLGD 
AHQAEQGAAG GSAVIALLPA LAPGDLPGQA RLSEALVAGL ARTTIRRLLL VGDFDVLDEP
GKYSEVEREC VAQVVDGLQR SALHWTLINA PQELAGLGME HFRSTEGTLE PGLAEPLRRL
SRIAAGMVDM LELDLHRSEH LNFVV