Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0080 |
Symbol | |
ID | 1043561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 90446 |
End bp | 91063 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143452 |
Product | hypothetical protein |
Protein accession | NP_742250 |
Protein GI | 26986825 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000365782 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAAACG CCGAAACCCC AGTGTTCAAA CTGGTCCTGT TCGGGCCTGA AAGCAGCCTG GGCAATGCCC TGATGGTCGA GCTGCTGTCG CGCCAGCACG AAGTCATCGC CGTGGTCGAC GACCTCAACC GCCATTCGCC GCGCCCGGGC CTGCACTTCA AGATAGGGGG GCTGGGTGAT GCCCACCAGG CGGAGCAGGG CGCAGCGGGC GGCTCGGCGG TGATCGCCCT GTTACCAGCG CTGGCGCCGG GTGACCTGCC GGGGCAGGCA CGCTTGAGCG AGGCGCTGGT GGCGGGGCTT GCGCGTACGA CTATACGCCG GCTGCTGCTT GTGGGCGATT TCGATGTGCT GGATGAACCG GGCAAGTACA GCGAGGTGGA GCGGGAATGC GTGGCCCAGG TGGTTGATGG GTTGCAGCGC AGTGCCTTGC ACTGGACGCT GATCAATGCA CCGCAGGAAC TGGCCGGGTT AGGCATGGAG CATTTTCGCA GTACCGAAGG CACGCTGGAG CCTGGGCTGG CTGAGCCGTT GCGGCGCTTG TCCAGGATCG CAGCGGGGAT GGTGGACATG CTGGAGCTGG ACTTGCACCG GAGCGAGCAC CTGAACTTCG TGGTCTAG
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Protein sequence | MKNAETPVFK LVLFGPESSL GNALMVELLS RQHEVIAVVD DLNRHSPRPG LHFKIGGLGD AHQAEQGAAG GSAVIALLPA LAPGDLPGQA RLSEALVAGL ARTTIRRLLL VGDFDVLDEP GKYSEVEREC VAQVVDGLQR SALHWTLINA PQELAGLGME HFRSTEGTLE PGLAEPLRRL SRIAAGMVDM LELDLHRSEH LNFVV
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