Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1665 |
Symbol | |
ID | 3766486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1552200 |
End bp | 1553093 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637798206 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_398162 |
Protein GI | 78780050 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAG TTATAGGACA AATAGATTTT GAAGATGATT TAAAGTTAAA TTTATTCCGA AAAGGACCTA AAAGAATTTA TGTCAATGAA TCAATTTTGA AAAAGCAGAG TGAAATAAAG AATTATATTA GGAGCGTATG TTTCTGTTCT AATGATATAA ATATTGTTAG AAGTGAACCC AGTTATCGAA GAACATGGAT TGATAAAGTC GTATTTCAAC TTGAACCAGT ATATTTAGAC TTAATAAGTA GATTTAACAG GCTTTTAAAA CAAAGAAGTC ATTTTTGGCG TTCAGAAAGC TTCCTAAATA GCCAATCCTC AGATATTTGT GAAAGCTTTG ATATGCAAAT GTCAATAATA AGTACAAGGA TTTTCAGGCG CAGAAGAAGG GCTTTATTAA AAATAAAACC ATATATTGAA TATTGGCATA ATCACTTAAG TAAATCTAAA GAGCAAATAG GCATCAATTA TCTTTCTGGG ATACAAAATA TAAGTCCAGA AGAAGAAGAA GAAGAGGTTA TTAGTAAGAA AATAGCAGAA CAACTATTAA ATCAGCGTTC AATCGAAGCT TTGACAGGTA AATGTAATTT TGGACCTCAT CGTGATGATA TTGAGTTTCT AATTAATAAT ATTTCAGTTA GAAAATATGG TTCATCTGGT CAGCAAAGAA CTTTTATCTT GGCGTTAAAG ATGGCTGAAT TAGATTTTTT AAGTAAAACA TTAAATGTCT CTCCAATACT GATATTGGAT GATGTCTTAG CGGAACTTGA TATAACTAGA CAAAATTTGT TATTAAATTC TGTTGGTAAA GATAGTCAAT GCTTTATAAG TGCGACACAT CTAGATAAAT TTAATCAATC TTTCTTAGGC TCTTCACAAA TGATCTATTT ATAA
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Protein sequence | MAVVIGQIDF EDDLKLNLFR KGPKRIYVNE SILKKQSEIK NYIRSVCFCS NDINIVRSEP SYRRTWIDKV VFQLEPVYLD LISRFNRLLK QRSHFWRSES FLNSQSSDIC ESFDMQMSII STRIFRRRRR ALLKIKPYIE YWHNHLSKSK EQIGINYLSG IQNISPEEEE EEVISKKIAE QLLNQRSIEA LTGKCNFGPH RDDIEFLINN ISVRKYGSSG QQRTFILALK MAELDFLSKT LNVSPILILD DVLAELDITR QNLLLNSVGK DSQCFISATH LDKFNQSFLG SSQMIYL
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