| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMT9312_1201 |
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| Symbol | |
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| ID | 3766008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9312 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007577 |
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| Strand | - |
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| Start bp | 1121821 |
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| End bp | 1122390 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 637797729 |
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| Product | Tfp pilus assembly protein PilE-like |
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| Protein accession | YP_397696 |
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| Protein GI | 78779584 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTTCAA ATTTATTTGT TAAAGATAAA AAAGCATTCA CTTTAGTAGA GTTAGTAGTT
GTCGTTGGCA TTATTGGAAT ATTATCTGCA ATAGCAATAC CAAGTTTTCG AAACACCGTC
TATAAAACTA GGCAAAAAGA AGCAACTACA TTATTGTCTT CATATTTGAG ATCTGCTGAA
GCATATTATG TTGAATTTGG TTCGATAGTT CAAAATACCT CTGAACTTGG ACATTTTTTG
AAGATCACAG GTTGTTGTTC AGTTTGTAGT TGGGACCATA ATCCAAAATA TTGCAAATCA
AATTCACCAA TGAACTTTAA TGATAGAGAA TTAGTAAGTT GGAGAACTGA TAACGGCCTA
TATACTATTG CTATGCATCC TCAGGCGGAA GAGTTAATTT ATTTCATAGC TTATCCAGAA
CACGAAATGG GCTTCCAAGG TTATGGAGTT GCTGCATGCT TTAGTGGGAA ATATGGAATT
AAAAAAATTA TTGAAAATAA TAATAATTTA GAAAAGATTA CACATCCACC AGGATGTGGA
GAGAACAATG ATGATTGGGT TCACCCGTAA
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| Protein sequence | MFSNLFVKDK KAFTLVELVV VVGIIGILSA IAIPSFRNTV YKTRQKEATT LLSSYLRSAE
AYYVEFGSIV QNTSELGHFL KITGCCSVCS WDHNPKYCKS NSPMNFNDRE LVSWRTDNGL
YTIAMHPQAE ELIYFIAYPE HEMGFQGYGV AACFSGKYGI KKIIENNNNL EKITHPPGCG
ENNDDWVHP
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