Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMT9312_1107 |
Symbol | |
ID | 3765911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9312 |
Kingdom | Bacteria |
Replicon accession | NC_007577 |
Strand | - |
Start bp | 1020099 |
End bp | 1020998 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637797632 |
Product | lipoyl synthase |
Protein accession | YP_397602 |
Protein GI | 78779490 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.772098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGACA ATAATCTAAT CAAGAAAGAA AAAATCTTAA GACTTCCCTC TTGGATTAAA TTTCCTATTA GTAAAGCTTC AGAATTCGAA AAAATACAAA CACTCATCAA AAAATCAAAT TTTCATACTA TTTGTGAAGA AGCAAGATGT CCTAATAGAG CAGAATGTTA TGCCTCAGGA ACAGCCACTT TCTTACTGGG TGGATCGATA TGTTCTCGTT CATGTGCTTT TTGTCAGGTA AATAAAGGTA GACCTAGTTC TGTCAATATT GATGAATGTA CTCAAGTCGC TGAAGCAGTG AAAGTACTAA ATTTAAAATA TGTTGTTTTG ACATCTGTAG CTAGAGACGA TCTCCCTGAT CATGGTGCAA ATTTATTTAT ATCTACAATT GATGAGATCA GAAAAATTGA TTCAACAATT AAAATAGAGG TTTTAACTCC TGATTTATGG GGTGGGGGCA AAAATTTTGA TGAAACTAAT AACCTTCAGA CTGAGAGATT GAAGATGATT TTAGAAAAAG ATCCAATATG CTTTAATCAT AACCTTGAAA CTGTTGAAAG ACTGCAAAAA GAAGTTAGGA GGGGTGCAAA TTACAAAAAA TCCCTTAGTT TACTAAAAAA GTCAAAAGAT ATTGCTCCTC ATATTCAAAC TAAATCAGGC ATTATGTTAG GTCTTGGTGA AACATTGGAT GAAATAAAAA ATACAATTCA TGATCTTAAA AAAATAGATT GTGATCAAAT TACAATTGGC CAATATTTAA GGCCCTCATT CAATCATTTG GAAGTTAAGA AATATTGGGA TCCATCAGAG TTTGAATATT TATATCGCTT CTCTAAGGAA TTAGGATTCA AAAAAGTATC TTCTGGCCCT TTAGTTAGAA GCAGTTATCA TGCGGGTTAA
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Protein sequence | MRDNNLIKKE KILRLPSWIK FPISKASEFE KIQTLIKKSN FHTICEEARC PNRAECYASG TATFLLGGSI CSRSCAFCQV NKGRPSSVNI DECTQVAEAV KVLNLKYVVL TSVARDDLPD HGANLFISTI DEIRKIDSTI KIEVLTPDLW GGGKNFDETN NLQTERLKMI LEKDPICFNH NLETVERLQK EVRRGANYKK SLSLLKKSKD IAPHIQTKSG IMLGLGETLD EIKNTIHDLK KIDCDQITIG QYLRPSFNHL EVKKYWDPSE FEYLYRFSKE LGFKKVSSGP LVRSSYHAG
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