Gene PMT9312_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_1107 
Symbol 
ID3765911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp1020099 
End bp1020998 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content32% 
IMG OID637797632 
Productlipoyl synthase 
Protein accessionYP_397602 
Protein GI78779490 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.772098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGACA ATAATCTAAT CAAGAAAGAA AAAATCTTAA GACTTCCCTC TTGGATTAAA 
TTTCCTATTA GTAAAGCTTC AGAATTCGAA AAAATACAAA CACTCATCAA AAAATCAAAT
TTTCATACTA TTTGTGAAGA AGCAAGATGT CCTAATAGAG CAGAATGTTA TGCCTCAGGA
ACAGCCACTT TCTTACTGGG TGGATCGATA TGTTCTCGTT CATGTGCTTT TTGTCAGGTA
AATAAAGGTA GACCTAGTTC TGTCAATATT GATGAATGTA CTCAAGTCGC TGAAGCAGTG
AAAGTACTAA ATTTAAAATA TGTTGTTTTG ACATCTGTAG CTAGAGACGA TCTCCCTGAT
CATGGTGCAA ATTTATTTAT ATCTACAATT GATGAGATCA GAAAAATTGA TTCAACAATT
AAAATAGAGG TTTTAACTCC TGATTTATGG GGTGGGGGCA AAAATTTTGA TGAAACTAAT
AACCTTCAGA CTGAGAGATT GAAGATGATT TTAGAAAAAG ATCCAATATG CTTTAATCAT
AACCTTGAAA CTGTTGAAAG ACTGCAAAAA GAAGTTAGGA GGGGTGCAAA TTACAAAAAA
TCCCTTAGTT TACTAAAAAA GTCAAAAGAT ATTGCTCCTC ATATTCAAAC TAAATCAGGC
ATTATGTTAG GTCTTGGTGA AACATTGGAT GAAATAAAAA ATACAATTCA TGATCTTAAA
AAAATAGATT GTGATCAAAT TACAATTGGC CAATATTTAA GGCCCTCATT CAATCATTTG
GAAGTTAAGA AATATTGGGA TCCATCAGAG TTTGAATATT TATATCGCTT CTCTAAGGAA
TTAGGATTCA AAAAAGTATC TTCTGGCCCT TTAGTTAGAA GCAGTTATCA TGCGGGTTAA
 
Protein sequence
MRDNNLIKKE KILRLPSWIK FPISKASEFE KIQTLIKKSN FHTICEEARC PNRAECYASG 
TATFLLGGSI CSRSCAFCQV NKGRPSSVNI DECTQVAEAV KVLNLKYVVL TSVARDDLPD
HGANLFISTI DEIRKIDSTI KIEVLTPDLW GGGKNFDETN NLQTERLKMI LEKDPICFNH
NLETVERLQK EVRRGANYKK SLSLLKKSKD IAPHIQTKSG IMLGLGETLD EIKNTIHDLK
KIDCDQITIG QYLRPSFNHL EVKKYWDPSE FEYLYRFSKE LGFKKVSSGP LVRSSYHAG