Gene PMT9312_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMT9312_0982 
Symbol 
ID3765786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9312 
KingdomBacteria 
Replicon accessionNC_007577 
Strand
Start bp916436 
End bp917230 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content31% 
IMG OID637797507 
Productputative multidrug efflux ABC transporter 
Protein accessionYP_397478 
Protein GI78779366 
COG category[R] General function prediction only 
COG ID[COG4587] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.820284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCTA ATTTGATTAA CCGCAAAATA TTCACCTTAT TAAAGGTGCA ATATTCTAAC 
ATGTTGGAAT ATAGGGTAGA AATTGCATTA TGGGCAATTT CAGGAATTAT TCCTTTTTTC
ATGTTAAACA TTTGGACAAA CAATAATCTA AATGAATCGA TAAACATTAG CGATGTTATG
CTTTCTAGGT ATTTCTTATG TGCTTTTTTT GTAAGACAGT TTTCTGTAGT TTGGGTTGTA
TTTAGCTTTG AAGAGGATTC TCTTATGGGG AAGGTATCTC CGTATTTAAT TCAACCTTTA
AATCCATTTT TCAGATATTT TGCACAACAT CTTGCAGAAC AAATAACAAG ATTTCCTTTC
GCACTAATAA TCGCATTTTT CTTTTTTATA TTCAATCCAG AAAGTATATG GATTCCAAAT
TTGGGTATTT TATTCTTATC GATAATATCG ACTTTCTTAT CTTTCTTAAT TCAATTTTTA
ATTCAGTCAA TAGTTGCATG TCTATGCTTC TGGACAGAGA AAGCATCATC GATAGAAAGA
TTGTTATTTA TTCCAACTTT ATTTCTCTCA GGTCTTTTAG CTCCAGTAGT TTCATTTCCC
GAATATGTTA AATCTTGGAT TTATTTAACT CCTTTTCCAT ATCTAATTGA TTTCCCTGCG
AACTTACTAT CAGGTAATGA AACAAACATT AGTGGAGGCT TAACTATGCA AATTGCATGG
ATTCTTTTAC TTTTCCCAAT ATTCAAAAAG ATCTGGTCTG AAGGAACGAA AAAATATACT
GCTATGGGCT CATGA
 
Protein sequence
MISNLINRKI FTLLKVQYSN MLEYRVEIAL WAISGIIPFF MLNIWTNNNL NESINISDVM 
LSRYFLCAFF VRQFSVVWVV FSFEEDSLMG KVSPYLIQPL NPFFRYFAQH LAEQITRFPF
ALIIAFFFFI FNPESIWIPN LGILFLSIIS TFLSFLIQFL IQSIVACLCF WTEKASSIER
LLFIPTLFLS GLLAPVVSFP EYVKSWIYLT PFPYLIDFPA NLLSGNETNI SGGLTMQIAW
ILLLFPIFKK IWSEGTKKYT AMGS